RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 A0A0G2JK05 382 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 PPP3R1P63098 170 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 ENDOGQ14249 297 aaKnown RBP17.51■□□□□ 0.39
TRIM47-204ENST00000587339 IGFL3Q6UXB1 125 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 TUSC5Q8IXB3 177 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 CPT1CQ8TCG5 803 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 SLITRK2Q9H156 845 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 TCF7L1Q9HCS4 588 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 BRD7Q9NPI1 651 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 G6PC2Q9NQR9 355 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 PARPBPQ9NWS1 579 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 WASF3Q9UPY6 502 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 CAMK2AQ9UQM7 478 aa17.51■□□□□ 0.39
TRIM47-204ENST00000587339 NOTOA8MTQ0 251 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 IGHG3P01860 377 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 NPR2P20594 1047 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 RNPS1Q15287 305 aaKnown RBP17.5■□□□□ 0.39
TRIM47-204ENST00000587339 CEP78Q5JTW2 689 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 FAM27BQ5VT28 67 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 SNX29P2Q8IUI4 249 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 GJC3Q8NFK1 279 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 DIRAS2Q96HU8 199 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 SLC25A18Q9H1K4 315 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 NIPAL2Q9H841 368 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 PNRC2Q9NPJ4 139 aaKnown RBP17.5■□□□□ 0.39
TRIM47-204ENST00000587339 FAM206AQ9NX38 181 aa17.5■□□□□ 0.39
TRIM47-204ENST00000587339 AK6Q9Y3D8 172 aaKnown RBP17.5■□□□□ 0.39
TRIM47-204ENST00000587339 PHF3Q92576 2039 aaKnown RBP17.5■□□□□ 0.39
TRIM47-204ENST00000587339 SPTBN2O15020 2390 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 PDCD5O14737 125 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 KRT33AO76009 404 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 SLC25A35Q3KQZ1 300 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 BCL2L15Q5TBC7 163 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 ZNF704Q6ZNC4 412 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-204ENST00000587339 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.49■□□□□ 0.39
TRIM47-204ENST00000587339 RNF122Q9H9V4 155 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 CALHM2Q9HA72 323 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 BCO1Q9HAY6 547 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 PCDHGA9Q9Y5G4 932 aaKnown RBP17.49■□□□□ 0.39
TRIM47-204ENST00000587339 ARPC4-TTLL3A0A0A6YYG9 625 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 ZNF724A8MTY0 619 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 HPGDSO60760 199 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 ISG15P05161 165 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 EPXP11678 715 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 ZNF169Q14929 603 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-204ENST00000587339 MCEMP1Q8IX19 187 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 SLCO5A1Q9H2Y9 848 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 OCEL1Q9H607 264 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 TMEM38BQ9NVV0 291 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 CLEC4AQ9UMR7 237 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 V9GYH0 126 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 DNAJC13O75165 2243 aa17.49■□□□□ 0.39
TRIM47-204ENST00000587339 TRBV5-7A0A0A0MS05 114 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 UBCP0CG48 685 aaKnown RBP17.48■□□□□ 0.39
TRIM47-204ENST00000587339 SLC2A2P11168 524 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-204ENST00000587339 THBS2P35442 1172 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 PSMA6P60900 246 aaKnown RBP17.48■□□□□ 0.39
TRIM47-204ENST00000587339 CEACAM16Q2WEN9 425 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 STAC2Q6ZMT1 411 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 LINGO2Q7L985 606 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 ZNF433Q8N7K0 673 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-204ENST00000587339 FOXB1Q99853 325 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 ZCCHC4Q9H5U6 513 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 HHLA2Q9UM44 414 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 DHDHQ9UQ10 334 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 SSUH2Q9Y2M2 353 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 MSRB2Q9Y3D2 182 aa17.48■□□□□ 0.39
TRIM47-204ENST00000587339 UPK1BO75841 260 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 YES1P07947 543 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 PRKXP51817 358 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 GRB2P62993 217 aaKnown RBP17.47■□□□□ 0.39
TRIM47-204ENST00000587339 IFITM3Q01628 133 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 TSPO2Q5TGU0 170 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 TMEM244Q5VVB8 128 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 GPR35Q9HC97 309 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 DDX28Q9NUL7 540 aaKnown RBP17.47■□□□□ 0.39
TRIM47-204ENST00000587339 ADAM30Q9UKF2 790 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 SLC5A6Q9Y289 635 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 FABP12A6NFH5 140 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 ANKRD61A6NGH8 418 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 TBX1O43435 398 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 DOK2O60496 412 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 IGHV3-9P01782 118 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 CD2P06729 351 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 FAM131AQ6UXB0 335 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 ASB5Q8WWX0 329 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 FBXO17Q96EF6 278 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 LINC00470Q9BZP3 86 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 PBOV1Q9GZY1 135 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 MOB1AQ9H8S9 216 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 ABCB10Q9NRK6 738 aa17.47■□□□□ 0.39
TRIM47-204ENST00000587339 LAMA5O15230 3695 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 A0A1B0GVG6 124 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 LOC107986453A0A1B0GWG9 222 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 OR6C65A6NJZ3 312 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 SLC22A20A6NK97 555 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 SLC19A2O60779 497 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 TTRP02766 147 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 B4GALT1P15291 398 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 ATF1P18846 271 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms