RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CYGBQ8WWM9 190 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 LURAP1Q96LR2 239 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 COQ7Q99807 217 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 UBTD1Q9HAC8 227 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 HAO2Q9NYQ3 351 aa16.58■□□□□ 0.24
DDX39A-204ENST00000586558 CISD1Q9NZ45 108 aaKnown RBP16.58■□□□□ 0.24
DDX39A-204ENST00000586558 WARS2Q9UGM6 360 aaKnown RBP16.58■□□□□ 0.24
DDX39A-204ENST00000586558 ITPR2Q14571 2701 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 C5orf49A4QMS7 147 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 H0YAE9 185 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 ICMTO60725 284 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 HTR1FP30939 366 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 RPS23P62266 143 aaKnown RBP16.57■□□□□ 0.24
DDX39A-204ENST00000586558 NKX6-1P78426 367 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-204ENST00000586558 POU4F2Q12837 409 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 IL18R1Q13478 541 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 OCLNQ16625 522 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 ZNF544Q6NX49 715 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 ARL9Q6T311 187 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 SLC16A9Q7RTY1 509 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 DPY19L4Q7Z388 723 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 DCXRQ7Z4W1 244 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 BCDIN3DQ7Z5W3 292 aaKnown RBP16.57■□□□□ 0.24
DDX39A-204ENST00000586558 MAP6Q96JE9 813 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 ZNF582Q96NG8 517 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-204ENST00000586558 DCLRE1CQ96SD1 692 aaKnown RBP16.57■□□□□ 0.24
DDX39A-204ENST00000586558 CNN2Q99439 309 aaKnown RBP16.57■□□□□ 0.24
DDX39A-204ENST00000586558 DHRS9Q9BPW9 319 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 YIPF3Q9GZM5 350 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 ZNF442Q9H7R0 627 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 CA10Q9NS85 328 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 DDX28Q9NUL7 540 aaKnown RBP16.57■□□□□ 0.24
DDX39A-204ENST00000586558 FAIMQ9NVQ4 179 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 DNAJC27Q9NZQ0 273 aa16.57■□□□□ 0.24
DDX39A-204ENST00000586558 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDX39A-204ENST00000586558 SNTNA6NMZ2 147 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 E7EQL1 145 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 SELENOFO60613 162 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 CCL2P13500 99 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 RPS27P42677 84 aaKnown RBP16.56■□□□□ 0.24
DDX39A-204ENST00000586558 ADARB1P78563 741 aaKnown RBP16.56■□□□□ 0.24
DDX39A-204ENST00000586558 SNTB2Q13425 540 aaKnown RBP16.56■□□□□ 0.24
DDX39A-204ENST00000586558 B3GLCTQ6Y288 498 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 RHOUQ7L0Q8 258 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 C1orf174Q8IYL3 243 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 ENTHD1Q8IYW4 607 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 PAQR4Q8N4S7 273 aaPredicted RBP16.56■□□□□ 0.24
DDX39A-204ENST00000586558 SETD9Q8NE22 299 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 RHOXF1Q8NHV9 184 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 OTOSQ8NHW6 89 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 ST7LQ8TDW4 575 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 NEUROG1Q92886 237 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 UBE2FQ969M7 185 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 Q96MT0 163 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 ATF6BQ99941 703 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 ADI1Q9BV57 179 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 BCL2L14Q9BZR8 327 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 PNRC2Q9NPJ4 139 aaKnown RBP16.56■□□□□ 0.24
DDX39A-204ENST00000586558 EIF3KQ9UBQ5 218 aaKnown RBP16.56■□□□□ 0.24
DDX39A-204ENST00000586558 TACC2O95359 2948 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 ROS1P08922 2347 aa16.56■□□□□ 0.24
DDX39A-204ENST00000586558 NOTCH2Q04721 2471 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 VSTM5A8MXK1 200 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 J3QW42 95 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 PSKH1P11801 424 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 CCNOP22674 350 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 CAPGP40121 348 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 NAA10P41227 235 aaPredicted RBP16.55■□□□□ 0.24
DDX39A-204ENST00000586558 RAD52P43351 418 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 NUDT6P53370 316 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 EIF2B1Q14232 305 aaKnown RBP16.55■□□□□ 0.24
DDX39A-204ENST00000586558 KRT80Q6KB66 452 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 TMEM154Q6P9G4 183 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 PAMR1Q6UXH9 720 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 MNTQ99583 582 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 ELOVL3Q9HB03 270 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 CLN6Q9NWW5 311 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 TMEM14AQ9Y6G1 99 aa16.55■□□□□ 0.24
DDX39A-204ENST00000586558 ZNF878C9JN71 531 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 GABRB1P18505 474 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 APOBEC3AP31941 199 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-204ENST00000586558 GLRXP35754 106 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 RGS6P49758 472 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 UCP2P55851 309 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 KRTAP27-1Q3LI81 207 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 ZNF691Q5VV52 312 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 OR10S1Q8NGN2 331 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 SMAP2Q8WU79 429 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-204ENST00000586558 RNF133Q8WVZ7 376 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 SLAMF6Q96DU3 332 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 ABHD6Q9BV23 337 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 HSPE1-MOB4S4R3N1 261 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 PLCE1Q9P212 2302 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 SPG11Q96JI7 2443 aa16.54■□□□□ 0.24
DDX39A-204ENST00000586558 POLQO75417 2590 aa16.53■□□□□ 0.24
DDX39A-204ENST00000586558 ENTPD6O75354 484 aa16.53■□□□□ 0.24
DDX39A-204ENST00000586558 ABHD16AO95870 558 aa16.53■□□□□ 0.24
DDX39A-204ENST00000586558 RAF1P04049 648 aa16.53■□□□□ 0.24
DDX39A-204ENST00000586558 LYNP07948 512 aa16.53■□□□□ 0.24
DDX39A-204ENST00000586558 TUBG1P23258 451 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms