RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 TXNDC12O95881 172 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 IGHV2-5P01817 119 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 CRABP1P29762 137 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 RGS6P49758 472 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 PGM2L1Q6PCE3 622 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 SMARCD3Q6STE5 483 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 THSD4Q6ZMP0 1018 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 MCUR1Q96AQ8 359 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 NUAK2Q9H093 628 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 ASH2LQ9UBL3 628 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 IL20RAQ9UHF4 553 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 ATPIF1Q9UII2 106 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 PURGQ9UJV8 347 aaKnown RBP14.39□□□□□ -0.11
TRIM47-203ENST00000586495 POLR1DQ9Y2S0 133 aa14.39□□□□□ -0.11
TRIM47-203ENST00000586495 A0A0G2JMP0 313 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 A0A0X1KG70 313 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 ISPDA4D126 451 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 IMPA2O14732 288 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 HSD17B1P14061 328 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 TNFRSF1AP19438 455 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 KITLGP21583 273 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 CDKN2AP42771 156 aaKnown RBP14.38□□□□□ -0.11
TRIM47-203ENST00000586495 FXYD6P3P58550 94 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 SPIBQ01892 262 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 CDK5R2Q13319 367 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 SEC23BQ15437 767 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 KCNMB1Q16558 191 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 PTCHD4Q6ZW05 846 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 FAM86B1Q8N7N1 296 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 OR4M2Q8NGB6 313 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 OR1F12Q8NHA8 337 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 PTP4A1Q93096 173 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 SAMD8Q96LT4 415 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 ERMAPQ96PL5 475 aaPredicted RBP14.38□□□□□ -0.11
TRIM47-203ENST00000586495 DCLRE1CQ96SD1 692 aaKnown RBP14.38□□□□□ -0.11
TRIM47-203ENST00000586495 G6PC2Q9NQR9 355 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 STARD10Q9Y365 291 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 V9GYQ6 96 aa14.38□□□□□ -0.11
TRIM47-203ENST00000586495 OR6C6A6NF89 314 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 J3QLI3 93 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 SURF4O15260 269 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 GATA3P23771 443 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 SLC6A6P31641 620 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 IFNGR2P38484 337 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 CENPAP49450 140 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 CCDC92Q53HC0 331 aaPredicted RBP14.37□□□□□ -0.11
TRIM47-203ENST00000586495 SAMD4BQ5PRF9 694 aaKnown RBP14.37□□□□□ -0.11
TRIM47-203ENST00000586495 C1orf94Q6P1W5 598 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 JAZF1Q86VZ6 243 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 PGAM4Q8N0Y7 254 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 GJC3Q8NFK1 279 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 OR5L1Q8NGL2 311 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 FANK1Q8TC84 345 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 ST7LQ8TDW4 575 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 ZNF418Q8TF45 676 aaPredicted RBP14.37□□□□□ -0.11
TRIM47-203ENST00000586495 HAVCR1Q96D42 359 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 CMBLQ96DG6 245 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 NSMCE2Q96MF7 247 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 FUZQ9BT04 418 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 NPTNQ9Y639 398 aa14.37□□□□□ -0.11
TRIM47-203ENST00000586495 ARPC3O15145 178 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 RER1O15258 196 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 OR10H3O60404 316 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 PPP1R3DO95685 299 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 RENP00797 406 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 SEMG1P04279 462 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 FABP3P05413 133 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 RAC2P15153 192 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 RFX4Q33E94 735 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 DCAF12L2Q5VW00 463 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 OR2Z1Q8NG97 314 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 SLC7A6Q92536 515 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 CDRT15Q96T59 188 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 GPA33Q99795 319 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 HDHD2Q9H0R4 259 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 OR52D1Q9H346 318 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 POFUT1Q9H488 388 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 TMEM106BQ9NUM4 274 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 NDE1Q9NXR1 346 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 UBAP1Q9NZ09 502 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 IL19Q9UHD0 177 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 TAGLN3Q9UI15 199 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 TMCC3Q9ULS5 477 aa14.36□□□□□ -0.11
TRIM47-203ENST00000586495 FPR3P25089 353 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 NOS3P29474 1203 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 SLC36A3Q495N2 470 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 OTPQ5XKR4 325 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 SLC27A4Q6P1M0 643 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 LEG1Q6P5S2 330 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 C16orf89Q6UX73 402 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 ZFAND2BQ8WV99 257 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 APOBEC3DQ96AK3 386 aaPredicted RBP14.35□□□□□ -0.11
TRIM47-203ENST00000586495 TSSK2Q96PF2 358 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 COQ7Q99807 217 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 IFT27Q9BW83 186 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 TMPRSS13Q9BYE2 586 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 SRA1Q9HD15 236 aaKnown RBP14.35□□□□□ -0.11
TRIM47-203ENST00000586495 CD300AQ9UGN4 299 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 PCDHB10Q9UN67 800 aa14.35□□□□□ -0.11
TRIM47-203ENST00000586495 B9D1Q9UPM9 204 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms