RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 NOX4Q9NPH5 578 aa18.04■□□□□ 0.48
ATG4D-204ENST00000586417 GDF2Q9UK05 429 aaPredicted RBP18.04■□□□□ 0.48
ATG4D-204ENST00000586417 CMAHPQ9Y471 501 aa18.04■□□□□ 0.48
ATG4D-204ENST00000586417 CFAP46Q8IYW2 2715 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 ACOD1A6NK06 481 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 RGS5O15539 181 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 DHHO43323 396 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 ACTL6AO96019 429 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 CD40LGP29965 261 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 OR10A3P58181 314 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 ZNF45Q02386 682 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 KLRB1Q12918 225 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 FAM180AQ6UWF9 173 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 CFAP77Q6ZQR2 320 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 CATSPERDQ86XM0 798 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 PARP16Q8N5Y8 322 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 MEIOBQ8N635 442 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 OR10AC1Q8NH08 325 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 NABP1Q96AH0 204 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 SNRNP40Q96DI7 357 aaKnown RBP18.03■□□□□ 0.48
ATG4D-204ENST00000586417 C1orf198Q9H425 327 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 EXO5Q9H790 373 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 ABCB9Q9NP78 766 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 SLC22A13Q9Y226 551 aa18.03■□□□□ 0.48
ATG4D-204ENST00000586417 PHF3Q92576 2039 aaKnown RBP18.03■□□□□ 0.48
ATG4D-204ENST00000586417 IGKV3D-15A0A087WSY6 115 aa18.02■□□□□ 0.48
ATG4D-204ENST00000586417 SFTPCP11686 197 aa18.02■□□□□ 0.48
ATG4D-204ENST00000586417 CFL1P23528 166 aaKnown RBP18.02■□□□□ 0.48
ATG4D-204ENST00000586417 Q499Y3 187 aa18.02■□□□□ 0.48
ATG4D-204ENST00000586417 HSD17B12Q53GQ0 312 aa18.02■□□□□ 0.48
ATG4D-204ENST00000586417 ZNF324BQ6AW86 544 aaPredicted RBP18.02■□□□□ 0.48
ATG4D-204ENST00000586417 ZNF676Q8N7Q3 588 aa18.02■□□□□ 0.48
ATG4D-204ENST00000586417 COMMD4Q9H0A8 199 aa18.02■□□□□ 0.48
ATG4D-204ENST00000586417 R4GMQ9 66 aa18.02■□□□□ 0.48
ATG4D-204ENST00000586417 SLC43A1O75387 559 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 CRYABP02511 175 aaKnown RBP18.02■□□□□ 0.47
ATG4D-204ENST00000586417 IFITM3Q01628 133 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 C3AR1Q16581 482 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 CEP78Q5JTW2 689 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 AAED1Q7RTV5 226 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 RDH10Q8IZV5 341 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 PPP1R14AQ96A00 147 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 ORAI1Q96D31 301 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 SLC30A2Q9BRI3 323 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 ULBP2Q9BZM5 246 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 PLSCR2Q9NRY7 297 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 CENPMQ9NSP4 180 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 ASH2LQ9UBL3 628 aa18.02■□□□□ 0.47
ATG4D-204ENST00000586417 GTF3C1Q12789 2109 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 GPR171O14626 319 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 H2BFMP0C1H6 154 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 THBS2P35442 1172 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 LSM6P62312 80 aaKnown RBP18.01■□□□□ 0.47
ATG4D-204ENST00000586417 DDI2Q5TDH0 399 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 SFXN4Q6P4A7 337 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 SYT9Q86SS6 491 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 SNX29P2Q8IUI4 249 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 OR51A4Q8NGJ6 313 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 TMEM45BQ96B21 275 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 ZNF837Q96EG3 531 aaPredicted RBP18.01■□□□□ 0.47
ATG4D-204ENST00000586417 CEP19Q96LK0 163 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 NELFAQ9H3P2 528 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 G6PC2Q9NQR9 355 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 ASF1BQ9NVP2 202 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 POLR1DQ9Y2S0 133 aa18.01■□□□□ 0.47
ATG4D-204ENST00000586417 KMT2BQ9UMN6 2715 aaPredicted RBP18■□□□□ 0.47
ATG4D-204ENST00000586417 TRBV5-7A0A0A0MS05 114 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 RAB3BP20337 219 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 MSR1P21757 451 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 ODF4Q2M2E3 257 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 SPANXN2Q5MJ10 180 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 PLXDC2Q6UX71 529 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 GPR148Q8TDV2 347 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 ZNF416Q9BWM5 594 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 ZCCHC4Q9H5U6 513 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 PNRC2Q9NPJ4 139 aaKnown RBP18■□□□□ 0.47
ATG4D-204ENST00000586417 B3GAT2Q9NPZ5 323 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 PAQR5Q9NXK6 330 aaPredicted RBP18■□□□□ 0.47
ATG4D-204ENST00000586417 EMC9Q9Y3B6 208 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 V9GYH0 126 aa18■□□□□ 0.47
ATG4D-204ENST00000586417 RP1L1Q8IWN7 2480 aaPredicted RBP18■□□□□ 0.47
ATG4D-204ENST00000586417 A0A1B0GVC2 190 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 A0A1B0GVG6 124 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 OCM2P0CE71 109 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 SRMP19623 302 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 DCTDP32321 178 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 ENDOGQ14249 297 aaKnown RBP17.99■□□□□ 0.47
ATG4D-204ENST00000586417 SGCAQ16586 387 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 SLC25A35Q3KQZ1 300 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 RHOUQ7L0Q8 258 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 FGD2Q7Z6J4 655 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 OR2AJ1Q8NGZ0 328 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 RBM24Q9BX46 236 aaKnown RBP17.99■□□□□ 0.47
ATG4D-204ENST00000586417 COMMD3Q9UBI1 195 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 RER1O15258 196 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 SYNGR4O95473 234 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 MAPK3P27361 379 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-204ENST00000586417 SOX2P48431 317 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 MMP16P51512 607 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 IDNKQ5T6J7 187 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms