RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 DNASE1L1P49184 302 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 CLDN17P56750 224 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 AP3S2P59780 193 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 RAC3P60763 192 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 BTG1P62324 171 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 FOXK1P85037 733 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 MFGE8Q08431 387 aaPredicted RBP10.01□□□□□ -0.81
LIG3-204ENST00000585740 C19orf57Q0VDD7 668 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 DYRK1AQ13627 763 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 TOMM20Q15388 145 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 RAB11BQ15907 218 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 C10orf128Q5T292 105 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 HES3Q5TGS1 186 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 ZNF468Q5VIY5 522 aaPredicted RBP10.01□□□□□ -0.81
LIG3-204ENST00000585740 ABHD17BQ5VST6 288 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 ESPNLQ6ZVH7 1005 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 CREB3L2Q70SY1 520 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 GLRX5Q86SX6 157 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 TMPRSS12Q86WS5 348 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 LINC00346Q8IVM7 164 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 WDFY1Q8IWB7 410 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 BEST3Q8N1M1 668 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 TOMM5Q8N4H5 51 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 OR10AC1Q8NH08 325 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 OR14L1PQ8NHC6 308 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 SYNPRQ8TBG9 265 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 SMIM4Q8WVI0 70 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 ASB5Q8WWX0 329 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 ZCCHC14Q8WYQ9 949 aaKnown RBP10.01□□□□□ -0.81
LIG3-204ENST00000585740 TMEM54Q969K7 222 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 CREB3L1Q96BA8 519 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 FOXRED1Q96CU9 486 aaPredicted RBP10.01□□□□□ -0.81
LIG3-204ENST00000585740 THOC3Q96J01 351 aaKnown RBP10.01□□□□□ -0.81
LIG3-204ENST00000585740 ABHD1Q96SE0 405 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 MMP28Q9H239 520 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 SEC61A2Q9H9S3 476 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 G6PC2Q9NQR9 355 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 ANKRD10Q9NXR5 420 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 GLTPQ9NZD2 209 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 COPZ2Q9P299 210 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 GDF2Q9UK05 429 aaPredicted RBP10.01□□□□□ -0.81
LIG3-204ENST00000585740 EMC9Q9Y3B6 208 aa10.01□□□□□ -0.81
LIG3-204ENST00000585740 TRAV8-7A0A075B6U6 113 aa10□□□□□ -0.81
LIG3-204ENST00000585740 A0A0J9YW62 118 aa10□□□□□ -0.81
LIG3-204ENST00000585740 LOC107986453A0A1B0GWG9 222 aa10□□□□□ -0.81
LIG3-204ENST00000585740 NAP1L6A6NFF2 107 aa10□□□□□ -0.81
LIG3-204ENST00000585740 ZNF814B7Z6K7 855 aa10□□□□□ -0.81
LIG3-204ENST00000585740 G3V3Y1 287 aa10□□□□□ -0.81
LIG3-204ENST00000585740 STMND1H3BQB6 276 aa10□□□□□ -0.81
LIG3-204ENST00000585740 GABARAPH6UMI1 98 aa10□□□□□ -0.81
LIG3-204ENST00000585740 SLC17A2O00624 439 aa10□□□□□ -0.81
LIG3-204ENST00000585740 CCNKO75909 580 aa10□□□□□ -0.81
LIG3-204ENST00000585740 MAS1P04201 325 aa10□□□□□ -0.81
LIG3-204ENST00000585740 GSTT2BP0CG30 244 aa10□□□□□ -0.81
LIG3-204ENST00000585740 FAM157BP0CG42 384 aa10□□□□□ -0.81
LIG3-204ENST00000585740 IGFBP3P17936 291 aaPredicted RBP10□□□□□ -0.81
LIG3-204ENST00000585740 ENPP1P22413 925 aa10□□□□□ -0.81
LIG3-204ENST00000585740 HSD11B1P28845 292 aa10□□□□□ -0.81
LIG3-204ENST00000585740 ZNF84P51523 738 aa10□□□□□ -0.81
LIG3-204ENST00000585740 SUCLG1P53597 346 aaKnown RBP10□□□□□ -0.81
LIG3-204ENST00000585740 B3GALT5-AS1P59052 145 aa10□□□□□ -0.81
LIG3-204ENST00000585740 PSMA6P60900 246 aaKnown RBP10□□□□□ -0.81
LIG3-204ENST00000585740 GRB2P62993 217 aaKnown RBP10□□□□□ -0.81
LIG3-204ENST00000585740 GABREP78334 506 aa10□□□□□ -0.81
LIG3-204ENST00000585740 OC90Q02509 493 aaPredicted RBP10□□□□□ -0.81
LIG3-204ENST00000585740 AIMP2Q13155 320 aaKnown RBP10□□□□□ -0.81
LIG3-204ENST00000585740 GPR176Q14439 515 aa10□□□□□ -0.81
LIG3-204ENST00000585740 TAF13Q15543 124 aa10□□□□□ -0.81
LIG3-204ENST00000585740 ODF4Q2M2E3 257 aa10□□□□□ -0.81
LIG3-204ENST00000585740 CARD17Q5XLA6 110 aa10□□□□□ -0.81
LIG3-204ENST00000585740 B3GNTL1Q67FW5 361 aaPredicted RBP10□□□□□ -0.81
LIG3-204ENST00000585740 LRFN4Q6PJG9 635 aa10□□□□□ -0.81
LIG3-204ENST00000585740 DHRS13Q6UX07 377 aa10□□□□□ -0.81
LIG3-204ENST00000585740 FOXL2NBQ6ZUU3 175 aa10□□□□□ -0.81
LIG3-204ENST00000585740 CDH24Q86UP0 819 aa10□□□□□ -0.81
LIG3-204ENST00000585740 ELMOD2Q8IZ81 293 aa10□□□□□ -0.81
LIG3-204ENST00000585740 PIP4P2Q8N4L2 257 aa10□□□□□ -0.81
LIG3-204ENST00000585740 NKAIN3Q8N8D7 197 aa10□□□□□ -0.81
LIG3-204ENST00000585740 OR9K2Q8NGE7 335 aa10□□□□□ -0.81
LIG3-204ENST00000585740 OR51A4Q8NGJ6 313 aa10□□□□□ -0.81
LIG3-204ENST00000585740 OR13C3Q8NGS6 347 aa10□□□□□ -0.81
LIG3-204ENST00000585740 OR6N1Q8NGY5 312 aa10□□□□□ -0.81
LIG3-204ENST00000585740 DEDD2Q8WXF8 326 aa10□□□□□ -0.81
LIG3-204ENST00000585740 YIPF5Q969M3 257 aa10□□□□□ -0.81
LIG3-204ENST00000585740 ORAI1Q96D31 301 aa10□□□□□ -0.81
LIG3-204ENST00000585740 SLC25A38Q96DW6 304 aa10□□□□□ -0.81
LIG3-204ENST00000585740 FER1L6-AS2Q96M78 137 aa10□□□□□ -0.81
LIG3-204ENST00000585740 SFXN2Q96NB2 322 aa10□□□□□ -0.81
LIG3-204ENST00000585740 ZFP3Q96NJ6 502 aa10□□□□□ -0.81
LIG3-204ENST00000585740 FAM173AQ9BQD7 235 aa10□□□□□ -0.81
LIG3-204ENST00000585740 MARVELD1Q9BSK0 173 aa10□□□□□ -0.81
LIG3-204ENST00000585740 SCNM1Q9BWG6 230 aa10□□□□□ -0.81
LIG3-204ENST00000585740 DPAGT1Q9H3H5 408 aa10□□□□□ -0.81
LIG3-204ENST00000585740 ZFP64Q9NPA5 681 aa10□□□□□ -0.81
LIG3-204ENST00000585740 ZNF275Q9NSD4 429 aaPredicted RBP10□□□□□ -0.81
LIG3-204ENST00000585740 STMN3Q9NZ72 180 aa10□□□□□ -0.81
LIG3-204ENST00000585740 B4GALT7Q9UBV7 327 aa10□□□□□ -0.81
LIG3-204ENST00000585740 ZNF221Q9UK13 617 aa10□□□□□ -0.81
LIG3-204ENST00000585740 CLEC4AQ9UMR7 237 aa10□□□□□ -0.81
LIG3-204ENST00000585740 MRPS7Q9Y2R9 242 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms