RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CBR1P16152 277 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 ZNF32P17041 273 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 APLNRP35414 380 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 RGS6P49758 472 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 GBX2P52951 348 aaPredicted RBP11.31□□□□□ -0.6
TRIM47-202ENST00000585333 WNT4P56705 351 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 BDH1Q02338 343 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 PPA1Q15181 289 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 MEP1BQ16820 701 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 TBC1D28Q2M2D7 210 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 CDONQ4KMG0 1287 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 CCDC58Q4VC31 144 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 LIX1LQ8IVB5 337 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 ST7LQ8TDW4 575 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 ZNRF4Q8WWF5 429 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 SLAMF6Q96DU3 332 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 FOXN4Q96NZ1 517 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 OR8B4Q96RC9 309 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 KCNS3Q9BQ31 491 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 MRPS26Q9BYN8 205 aaKnown RBP11.31□□□□□ -0.6
TRIM47-202ENST00000585333 OR2H1Q9GZK4 316 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 TRIM36Q9NQ86 728 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
TRIM47-202ENST00000585333 ZG16O60844 167 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 SEC14L2O76054 403 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 GOSR1O95249 250 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 SERPINA5P05154 406 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 MMP7P09237 267 aaPredicted RBP11.3□□□□□ -0.6
TRIM47-202ENST00000585333 TUBG1P23258 451 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 HTR5AP47898 357 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 GDI2P50395 445 aaKnown RBP11.3□□□□□ -0.6
TRIM47-202ENST00000585333 TPTEP56180 551 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 HIKESHIQ53FT3 197 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 B3GLCTQ6Y288 498 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 NCCRP1Q6ZVX7 275 aaPredicted RBP11.3□□□□□ -0.6
TRIM47-202ENST00000585333 ZNF367Q7RTV3 350 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 LINC00346Q8IVM7 164 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 OR1F12Q8NHA8 337 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 ITLN2Q8WWU7 325 aaPredicted RBP11.3□□□□□ -0.6
TRIM47-202ENST00000585333 THRSPQ92748 146 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 S100PBPQ96BU1 408 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 FBXO17Q96EF6 278 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 SIGLEC11Q96RL6 698 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 KCNJ15Q99712 375 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 MED18Q9BUE0 208 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 ISYNA1Q9NPH2 558 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 TUBG2Q9NRH3 451 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 CENPMQ9NSP4 180 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 ZNF391Q9UJN7 358 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 SPEF1Q9Y4P9 236 aa11.3□□□□□ -0.6
TRIM47-202ENST00000585333 KLF2Q9Y5W3 355 aaPredicted RBP11.3□□□□□ -0.6
TRIM47-202ENST00000585333 CASKO14936 926 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 RER1O15258 196 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 APOL3O95236 402 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 GPANK1O95872 356 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 IGKV3-15P01624 115 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 HLA-HP01893 362 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 OPRL1P41146 370 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 PSG4Q00888 419 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 FAM27E3Q08E93 113 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 SPHARQ15513 63 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 PABPC1L2AQ5JQF8 200 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 LYPD4Q6UWN0 246 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 DRAM2Q6UX65 266 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 TMEM108Q6UXF1 575 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 VASH1Q7L8A9 365 aaPredicted RBP11.29□□□□□ -0.6
TRIM47-202ENST00000585333 LHFPL3Q86UP9 236 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 NANOGP1Q8N7R0 232 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 YIPF7Q8N8F6 280 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 RORBQ92753 470 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 TBX5Q99593 518 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 ELOVL3Q9HB03 270 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 B3GNT2Q9NY97 397 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 ERVK-18Q9QC07 812 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 CRNNQ9UBG3 495 aaPredicted RBP11.29□□□□□ -0.6
TRIM47-202ENST00000585333 EIF3KQ9UBQ5 218 aaKnown RBP11.29□□□□□ -0.6
TRIM47-202ENST00000585333 GNG8Q9UK08 70 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 SLC25A15Q9Y619 301 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 NCOA6Q14686 2063 aaPredicted RBP11.29□□□□□ -0.6
TRIM47-202ENST00000585333 MYO7BQ6PIF6 2116 aa11.29□□□□□ -0.6
TRIM47-202ENST00000585333 TUBAL3A6NHL2 446 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 SYNGR3O43761 229 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 CLPTM1O96005 669 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 MT-ND2P03891 347 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 LIMS3P0CW19 117 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 LIMS4P0CW20 117 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 EPXP11678 715 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 CFL1P23528 166 aaKnown RBP11.28□□□□□ -0.6
TRIM47-202ENST00000585333 PTAFRP25105 342 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 STOMP27105 288 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 C21orf33P30042 268 aaPredicted RBP11.28□□□□□ -0.6
TRIM47-202ENST00000585333 TTKP33981 857 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 TGM4P49221 684 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 MMP16P51512 607 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 FOXG1P55316 489 aaPredicted RBP11.28□□□□□ -0.6
TRIM47-202ENST00000585333 ZNF85Q03923 595 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 ACSM1Q08AH1 577 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 GPR50Q13585 617 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 IRF3Q14653 427 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 TMEM154Q6P9G4 183 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms