RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 VNN3Q9NY84 501 aa17.44■□□□□ 0.38
SS18-224ENST00000584083 OR6C68A6NDL8 312 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 H3BSA7 217 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 RER1O15258 196 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 CDC14BO60729 498 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 LILRA1O75019 489 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 TACSTD2P09758 323 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 RAP2AP10114 183 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 GAAP10253 952 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 GPR6P46095 362 aaPredicted RBP17.43■□□□□ 0.38
SS18-224ENST00000584083 MRPS11P82912 194 aaKnown RBP17.43■□□□□ 0.38
SS18-224ENST00000584083 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.43■□□□□ 0.38
SS18-224ENST00000584083 DBPQ10586 325 aaPredicted RBP17.43■□□□□ 0.38
SS18-224ENST00000584083 TRAP1Q12931 704 aaKnown RBP17.43■□□□□ 0.38
SS18-224ENST00000584083 TRIP10Q15642 601 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 DNAL1Q4LDG9 190 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 CCDC92Q53HC0 331 aaPredicted RBP17.43■□□□□ 0.38
SS18-224ENST00000584083 ZNF770Q6IQ21 691 aaPredicted RBP17.43■□□□□ 0.38
SS18-224ENST00000584083 OR1F12Q8NHA8 337 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 SLC7A6Q92536 515 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 YIPF5Q969M3 257 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 MSI2Q96DH6 328 aaKnown RBP17.43■□□□□ 0.38
SS18-224ENST00000584083 TBC1D23Q9NUY8 699 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 TBCCD1Q9NVR7 557 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 NKIRAS2Q9NYR9 191 aa17.43■□□□□ 0.38
SS18-224ENST00000584083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.42■□□□□ 0.388e-11■■■■■ 40.5
SS18-224ENST00000584083 ACOT8O14734 319 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 PPIHO43447 177 aaKnown RBP17.42■□□□□ 0.38
SS18-224ENST00000584083 SPRY3O43610 288 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 LMX1BO60663 402 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 HLA-DQA2P01906 255 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 GSTM3P21266 225 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 MICAQ29983 383 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 CHRFAM7AQ494W8 412 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 FAM166AQ6J272 317 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 RASSF6Q6ZTQ3 369 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 NPEPL1Q8NDH3 523 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 GJC3Q8NFK1 279 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 SLC26A10Q8NG04 563 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 CHID1Q9BWS9 393 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 RACGAP1Q9H0H5 632 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 ZNF275Q9NSD4 429 aaPredicted RBP17.42■□□□□ 0.38
SS18-224ENST00000584083 IL20Q9NYY1 176 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 KCNS2Q9ULS6 477 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 LHFPL6Q9Y693 200 aa17.42■□□□□ 0.38
SS18-224ENST00000584083 OR6C6A6NF89 314 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 TIMM8AO60220 97 aaPredicted RBP17.41■□□□□ 0.38
SS18-224ENST00000584083 TGFAP01135 160 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 TMEM33P57088 247 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 TEKQ02763 1124 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 SLC36A3Q495N2 470 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 TMEM255AQ5JRV8 349 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 CORO6Q6QEF8 472 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 ZBTB46Q86UZ6 589 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 ADGRG5Q8IZF4 528 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 HPS1Q92902 700 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 CDADC1Q9BWV3 514 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 TSSK6Q9BXA6 273 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 PLA2G12AQ9BZM1 189 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 CYSLTR2Q9NS75 346 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 CDC42EP3Q9UKI2 254 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 STARD10Q9Y365 291 aa17.41■□□□□ 0.38
SS18-224ENST00000584083 AQP12BA6NM10 295 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 BHLHE40O14503 412 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 CST1P01037 141 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 DBHP09172 617 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 TUBG1P23258 451 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 IL2RGP31785 369 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 LIPAP38571 399 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 MMP15P51511 669 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 CCNIQ14094 377 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 USP51Q70EK9 711 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 AQP12AQ8IXF9 295 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 CYB561A3Q8NBI2 242 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 OR8D4Q8NGM9 314 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 OR2AJ1Q8NGZ0 328 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 SOX7Q9BT81 388 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 BEX2Q9BXY8 128 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 HDHD2Q9H0R4 259 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 POFUT1Q9H488 388 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 NARFLQ9H6Q4 476 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 SAP30LQ9HAJ7 183 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 TUBG2Q9NRH3 451 aa17.4■□□□□ 0.38
SS18-224ENST00000584083 CGGBP1Q9UFW8 167 aaPredicted RBP17.4■□□□□ 0.38
SS18-224ENST00000584083 IGHV1-69-2A0A0G2JMI3 117 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 DHRS12A0PJE2 317 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 ZSCAN5BA6NJL1 495 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 GNGT2O14610 69 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 RP2O75695 350 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 SOX14O95416 240 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 IGHV1-46P01743 117 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 TFP02787 698 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 PYCR1P32322 319 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 CRYBB2P43320 205 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 HIST1H3AP68431 136 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 COX10Q12887 443 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 PSG7Q13046 419 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 ZMAT1Q5H9K5 638 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 FAM209AQ5JX71 171 aa17.39■□□□□ 0.37
SS18-224ENST00000584083 HIST2H3PS2Q5TEC6 136 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms