RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 SRA1Q9HD15 236 aaKnown RBP18.25■□□□□ 0.51
PPP4R1-228ENST00000584074 TBCCD1Q9NVR7 557 aa18.25■□□□□ 0.51
PPP4R1-228ENST00000584074 KLHL21Q9UJP4 597 aa18.25■□□□□ 0.51
PPP4R1-228ENST00000584074 B9D1Q9UPM9 204 aa18.25■□□□□ 0.51
PPP4R1-228ENST00000584074 LYVE1Q9Y5Y7 322 aa18.25■□□□□ 0.51
PPP4R1-228ENST00000584074 TCRBV5S2A0A599 114 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 OR6C6A6NF89 314 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 KRT36O76013 467 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 T-ENOLP0DO92 83 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 GAAP10253 952 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 SRD5A1P18405 259 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 HMGA2P52926 109 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 PSG7Q13046 419 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 AVPI1Q5T686 147 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 DNM1P34Q6PK57 102 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 ZNF620Q6ZNG0 422 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 CXXC5Q7LFL8 322 aaKnown RBP18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 JAZF1Q86VZ6 243 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 OR6V1Q8N148 313 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 OR9Q2Q8NGE9 314 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 OR1F12Q8NHA8 337 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 MSL2Q9HCI7 577 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 POLR1DQ9Y2S0 133 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 STARD10Q9Y365 291 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 LHFPL6Q9Y693 200 aa18.24■□□□□ 0.51
PPP4R1-228ENST00000584074 TNFRSF11BO00300 401 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 DYNC1I1O14576 645 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 RENP00797 406 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 DBHP09172 617 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 HNF1AP20823 631 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 NOS3P29474 1203 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 MAGEA2P43356 314 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 MS4A2Q01362 244 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 TEKQ02763 1124 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 MVKQ03426 396 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 MTX3Q5HYI7 312 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 FAM209AQ5JX71 171 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 DHFR2Q86XF0 187 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 ARHGAP24Q8N264 748 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 BTBD10Q9BSF8 475 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 FN3KQ9H479 309 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 EGLN3Q9H6Z9 239 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 RPRD1BQ9NQG5 326 aaKnown RBP18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 CYSLTR2Q9NS75 346 aa18.23■□□□□ 0.51
PPP4R1-228ENST00000584074 OR6C68A6NDL8 312 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 B4DSR2 109 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 FAM157AC9JC47 383 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 TIMM8AO60220 97 aaPredicted RBP18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 GSTM3P21266 225 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 CALB2P22676 271 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 LIPAP38571 399 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 LMO4P61968 165 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 HIST1H3AP68431 136 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 PPP1R8Q12972 351 aaKnown RBP18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 SPRNQ5BIV9 151 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 CLEC12AQ5QGZ9 265 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 SLC35F1Q5T1Q4 408 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 HIST2H3PS2Q5TEC6 136 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 LCN8Q6JVE9 175 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 CORO6Q6QEF8 472 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 HIST2H3AQ71DI3 136 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 NPEPL1Q8NDH3 523 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 SDR9C7Q8NEX9 313 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 SLC26A10Q8NG04 563 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 OR4C15Q8NGM1 316 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 LPAR2Q9HBW0 351 aa18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 CGGBP1Q9UFW8 167 aaPredicted RBP18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 TMEFF2Q9UIK5 374 aaPredicted RBP18.22■□□□□ 0.51
PPP4R1-228ENST00000584074 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.21■□□□□ 0.512e-7■■■■■ 27
PPP4R1-228ENST00000584074 PHF1O43189 567 aaPredicted RBP18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 IDH3BO43837 385 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 TFP02787 698 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 DVL1P1P54792 670 aaPredicted RBP18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 TRIM25Q14258 630 aaKnown RBP18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 HFEQ30201 348 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 ZNF770Q6IQ21 691 aaPredicted RBP18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 PGM2L1Q6PCE3 622 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 GJC3Q8NFK1 279 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 OR52E2Q8NGJ4 325 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 CCL17Q92583 94 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 CMBLQ96DG6 245 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 ELMOD3Q96FG2 381 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 TRIM15Q9C019 465 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 EGLN1Q9GZT9 426 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 MUC13Q9H3R2 512 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 PURGQ9UJV8 347 aaKnown RBP18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 ZDHHC8Q9ULC8 765 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 CDH10Q9Y6N8 788 aa18.21■□□□□ 0.51
PPP4R1-228ENST00000584074 RNF212BA8MTL3 300 aa18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 CLDN25C9JDP6 229 aa18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 GASTP01350 101 aa18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 ADH4P08319 380 aa18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 TUBG1P23258 451 aa18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 HNRNPA0Q13151 305 aaKnown RBP18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 ZBTB46Q86UZ6 589 aa18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 CLPTM1LQ96KA5 538 aa18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 MAGIXQ9H6Y5 334 aa18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 TUBG2Q9NRH3 451 aa18.2■□□□□ 0.5
PPP4R1-228ENST00000584074 VNN3Q9NY84 501 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms