RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TOMM5Q8N4H5 51 aa20.12■□□□□ 0.81
CCDC47-204ENST00000582252 ASB5Q8WWX0 329 aa20.12■□□□□ 0.81
CCDC47-204ENST00000582252 ZFP3Q96NJ6 502 aa20.12■□□□□ 0.81
CCDC47-204ENST00000582252 MOB1AQ9H8S9 216 aa20.12■□□□□ 0.81
CCDC47-204ENST00000582252 G6PC2Q9NQR9 355 aa20.12■□□□□ 0.81
CCDC47-204ENST00000582252 OR5V1Q9UGF6 321 aa20.12■□□□□ 0.81
CCDC47-204ENST00000582252 FBXL3Q9UKT7 428 aa20.12■□□□□ 0.81
CCDC47-204ENST00000582252 ALPK2Q86TB3 2170 aa20.12■□□□□ 0.81
CCDC47-204ENST00000582252 MED13Q9UHV7 2174 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 KIAA1549Q9HCM3 1950 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 ZNF878C9JN71 531 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 QDPRP09417 244 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 CSNK1A1P48729 337 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 CORO6Q6QEF8 472 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 CREB3L2Q70SY1 520 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 OR13C3Q8NGS6 347 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 SYNPRQ8TBG9 265 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 GLTPQ9NZD2 209 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 KLK13Q9UKR3 277 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 BOKQ9UMX3 212 aaPredicted RBP20.11■□□□□ 0.81
CCDC47-204ENST00000582252 CACNG2Q9Y698 323 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 AKAP13Q12802 2813 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 CEP295Q9C0D2 2601 aa20.11■□□□□ 0.81
CCDC47-204ENST00000582252 MEGF11A6BM72 1044 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 EIF1AYO14602 144 aaKnown RBP20.1■□□□□ 0.81
CCDC47-204ENST00000582252 RAMP1O60894 148 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 CCNKO75909 580 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 CNR1P21554 472 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 AGFG1P52594 562 aaKnown RBP20.1■□□□□ 0.81
CCDC47-204ENST00000582252 CLDN20P56880 219 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 CD300CQ08708 224 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 ABHD17BQ5VST6 288 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 GLT8D1Q68CQ7 371 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 ASB18Q6ZVZ8 466 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 SMIM4Q8WVI0 70 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 YIPF5Q969M3 257 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 INTS12Q96CB8 462 aaKnown RBP20.1■□□□□ 0.81
CCDC47-204ENST00000582252 HAVCR1Q96D42 359 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 SLC25A38Q96DW6 304 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 SF3B5Q9BWJ5 86 aaKnown RBP20.1■□□□□ 0.81
CCDC47-204ENST00000582252 STMN3Q9NZ72 180 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 NLKQ9UBE8 527 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 GDF2Q9UK05 429 aaPredicted RBP20.1■□□□□ 0.81
CCDC47-204ENST00000582252 FREM2Q5SZK8 3169 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 LOC107986453A0A1B0GWG9 222 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 ORC5O43913 435 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 FAM157BP0CG42 384 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 EIF1AXP47813 144 aaKnown RBP20.1■□□□□ 0.81
CCDC47-204ENST00000582252 CLDN12P56749 244 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 RAC3P60763 192 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 KRT74Q7RTS7 529 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 OR9K2Q8NGE7 335 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 OR6N1Q8NGY5 312 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 PSMF1Q92530 271 aa20.1■□□□□ 0.81
CCDC47-204ENST00000582252 A0A0J9YW62 118 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 HMX3A6NHT5 357 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 H3BSH0 61 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 TNFSF11O14788 317 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 LANCL1O43813 399 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 HSD11B1P28845 292 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 MNDAP41218 407 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 B3GALT5-AS1P59052 145 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 GPR176Q14439 515 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 TAF13Q15543 124 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 RAB11BQ15907 218 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 ESPNLQ6ZVH7 1005 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 LINGO2Q7L985 606 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 DNAAF1Q8NEP3 725 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 TMEM54Q969K7 222 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 CREB3L1Q96BA8 519 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 LRFN1Q9P244 771 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 LHFPL6Q9Y693 200 aa20.09■□□□□ 0.81
CCDC47-204ENST00000582252 LSM6P62312 80 aaKnown RBP20.08■□□□□ 0.81
CCDC47-204ENST00000582252 TMEM69Q5SWH9 247 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 C10orf128Q5T292 105 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 YRDCQ86U90 279 aaKnown RBP20.08■□□□□ 0.81
CCDC47-204ENST00000582252 PPP1R14AQ96A00 147 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 FER1L6-AS2Q96M78 137 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 SFXN2Q96NB2 322 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 MARVELD1Q9BSK0 173 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 OR2B2Q9GZK3 357 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 EMC7Q9NPA0 242 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 ZFP64Q9NPA5 681 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 FAM206AQ9NX38 181 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 ACACAQ13085 2346 aa20.08■□□□□ 0.81
CCDC47-204ENST00000582252 LRRC3CA6NJW4 275 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 GABARAPH6UMI1 98 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 LINC01387J3KSC0 135 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 SLC17A2O00624 439 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 ECDO95905 644 aaPredicted RBP20.07■□□□□ 0.8
CCDC47-204ENST00000582252 ENPP1P22413 925 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 SLC6A1P30531 599 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 ZNF133P52736 654 aaPredicted RBP20.07■□□□□ 0.8
CCDC47-204ENST00000582252 AP3S2P59780 193 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 DGCR2P98153 550 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 VASH2Q86V25 355 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 OR2M2Q96R28 347 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 PLEKHA1Q9HB21 404 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 COPZ2Q9P299 210 aa20.07■□□□□ 0.8
CCDC47-204ENST00000582252 ZNF221Q9UK13 617 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms