RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ROBO4Q8WZ75 1007 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 SLAMF6Q96DU3 332 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 OR2M2Q96R28 347 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 ATF6BQ99941 703 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 ZNF552Q9H707 407 aaPredicted RBP8.24□□□□□ -1.09
SS18-220ENST00000582092 BRD7Q9NPI1 651 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 ABRACLQ9P1F3 81 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 OR52A1Q9UKL2 312 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 RCE1Q9Y256 329 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 EMC9Q9Y3B6 208 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 AK6Q9Y3D8 172 aaKnown RBP8.24□□□□□ -1.09
SS18-220ENST00000582092 LRP12Q9Y561 859 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 N6AMT1Q9Y5N5 214 aa8.24□□□□□ -1.09
SS18-220ENST00000582092 KALRNO60229 2985 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 PINLYPA6NC86 204 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 ACOD1A6NK06 481 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 ZNF814B7Z6K7 855 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 ZNF878C9JN71 531 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 K7EM74 188 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 TFECO14948 347 aaPredicted RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 DHHO43323 396 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 HPGDSO60760 199 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 RAMP1O60894 148 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 PDGFAP04085 211 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 NPR2P20594 1047 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 PTBP1P26599 531 aaKnown RBP eCLIP8.23□□□□□ -1.09
SS18-220ENST00000582092 SUCLG1P53597 346 aaKnown RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 NANOS3P60323 173 aaKnown RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 LSM6P62312 80 aaKnown RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 GRB2P62993 217 aaKnown RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 PITPNAQ00169 270 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 FOXO1Q12778 655 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 WDR38Q5JTN6 314 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 FAM27D1Q5T7N8 215 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 OTPQ5XKR4 325 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 TRIQKQ629K1 86 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 CNIH2Q6PI25 160 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 LRRC28Q86X40 367 aaPredicted RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 COMMD2Q86X83 199 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 CENPSQ8N2Z9 138 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 FAM109AQ8N4B1 249 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 TMEM251Q8N6I4 163 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 ZNF283Q8N7M2 679 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 SAMD12Q8N8I0 201 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 TRMT10AQ8TBZ6 339 aaKnown RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 TMEM54Q969K7 222 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 PHF21AQ96BD5 680 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 ZNF775Q96BV0 537 aaPredicted RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 C4orf45Q96LM5 186 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 DERL3Q96Q80 235 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 DCLRE1CQ96SD1 692 aaKnown RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 MFRPQ9BY79 579 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 HES7Q9BYE0 225 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 SRXN1Q9BYN0 137 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 DEFB127Q9H1M4 99 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 NELFAQ9H3P2 528 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 ZNF703Q9H7S9 590 aaPredicted RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 EMC7Q9NPA0 242 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 RABL2AQ9UBK7 228 aaPredicted RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 GDF2Q9UK05 429 aaPredicted RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 HHLA2Q9UM44 414 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 RABL2BQ9UNT1 228 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 NOSIPQ9Y314 301 aaKnown RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 UGT2A1Q9Y4X1 527 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 V9GY05 133 aa8.23□□□□□ -1.09
SS18-220ENST00000582092 HELZ2Q9BYK8 2649 aaKnown RBP8.23□□□□□ -1.09
SS18-220ENST00000582092 SVILO95425 2214 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 CPAMD8Q8IZJ3 1885 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 TRGV5A0A0B4J1U4 118 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 TRAV17A0A0B4J275 112 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 A0A1B0GVI7 797 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 MEGF11A6BM72 1044 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 OR6C65A6NJZ3 312 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 OR4C45A6NMZ5 311 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 H3BSH0 61 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 SMAD9O15198 467 aaKnown RBP8.22□□□□□ -1.09
SS18-220ENST00000582092 CYTIPO60759 359 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 MRPL33O75394 65 aaKnown RBP8.22□□□□□ -1.09
SS18-220ENST00000582092 SC5DO75845 299 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 FARS2O95363 451 aaKnown RBP8.22□□□□□ -1.09
SS18-220ENST00000582092 ABHD16AO95870 558 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 MAS1P04201 325 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 UBCP0CG48 685 aaKnown RBP8.22□□□□□ -1.09
SS18-220ENST00000582092 ACHEP22303 614 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 AZGP1P25311 298 aaKnown RBP8.22□□□□□ -1.09
SS18-220ENST00000582092 CDAP32320 146 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 DCTDP32321 178 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 EVX1P49640 407 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 GFRA1P56159 465 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 OR10A3P58181 314 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 BCL2A1Q16548 175 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 KCNMB1Q16558 191 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 PCK2Q16822 640 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 GLT8D1Q68CQ7 371 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 CORO6Q6QEF8 472 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 BAIAP2L2Q6UXY1 529 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 NHLRC1Q6VVB1 395 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 RHOUQ7L0Q8 258 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 GGNQ86UU5 652 aa8.22□□□□□ -1.09
SS18-220ENST00000582092 CATSPERDQ86XM0 798 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms