RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 EIF3KQ9UBQ5 218 aaKnown RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 PSORS1C1Q9UIG5 152 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 EXOSC1Q9Y3B2 195 aaKnown RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 SPEF1Q9Y4P9 236 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 DOPEY1Q5JWR5 2465 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 A0A1W2PR80 420 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 ZNF878C9JN71 531 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 PTGES3LE9PB15 166 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 SLC1A7O00341 560 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 RER1O15258 196 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 MRPS14O60783 128 aaKnown RBP12.44□□□□□ -0.42
SKA2-205ENST00000580541 CRYAAP02489 173 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 H2BFMP0C1H6 154 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 PATE4P0C8F1 98 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 EEF1B2P24534 225 aaKnown RBP12.44□□□□□ -0.42
SKA2-205ENST00000580541 STOMP27105 288 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 GRNP28799 593 aaKnown RBP12.44□□□□□ -0.42
SKA2-205ENST00000580541 HTR5AP47898 357 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 ACTA2P62736 377 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 ACTG2P63267 376 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 TUBA1BP68363 451 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 TUBA4AP68366 448 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 ST3GAL4Q11206 333 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 RAB39AQ14964 217 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 BEX5Q5H9J7 111 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 TMEM154Q6P9G4 183 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 LYPD4Q6UWN0 246 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 MEX3BQ6ZN04 569 aaKnown RBP12.44□□□□□ -0.42
SKA2-205ENST00000580541 TUBA1AQ71U36 451 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 KRT77Q7Z794 578 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 C1orf174Q8IYL3 243 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 OR4F15Q8NGB8 312 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 OR52I1Q8NGK6 324 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 HAVCR2Q8TDQ0 301 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 GGHQ92820 318 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 SLAMF6Q96DU3 332 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 ATF6BQ99941 703 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 COPS4Q9BT78 406 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 KCNN3Q9UGI6 736 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 DIMT1Q9UNQ2 313 aaKnown RBP12.44□□□□□ -0.42
SKA2-205ENST00000580541 MYRFQ9Y2G1 1151 aa12.44□□□□□ -0.42
SKA2-205ENST00000580541 VSTM5A8MXK1 200 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 M0R1B8 84 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 XPNPEP2O43895 674 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 SULT1C4O75897 302 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 IGLV1-44P01699 117 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 KRT8P05787 483 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 ZNF14P17017 642 aaPredicted RBP12.43□□□□□ -0.42
SKA2-205ENST00000580541 IGFBP2P18065 325 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 CRYGSP22914 178 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 HSD11B1P28845 292 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 ZNF83P51522 516 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 IDH3GP51553 393 aaPredicted RBP12.43□□□□□ -0.42
SKA2-205ENST00000580541 TPTEP56180 551 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 GALK2Q01415 458 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 DBPQ10586 325 aaPredicted RBP12.43□□□□□ -0.42
SKA2-205ENST00000580541 CCDC92Q53HC0 331 aaPredicted RBP12.43□□□□□ -0.42
SKA2-205ENST00000580541 SP5Q6BEB4 398 aaPredicted RBP12.43□□□□□ -0.42
SKA2-205ENST00000580541 ZNF774Q6NX45 483 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 ZNF322Q6U7Q0 402 aaPredicted RBP12.43□□□□□ -0.42
SKA2-205ENST00000580541 TMPRSS11AQ6ZMR5 421 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 VASH1Q7L8A9 365 aaPredicted RBP12.43□□□□□ -0.42
SKA2-205ENST00000580541 FAM220AQ7Z4H9 259 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 ZNF679Q8IYX0 411 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 SLC30A7Q8NEW0 376 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 AKR7LQ8NHP1 331 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 FGFBP3Q8TAT2 258 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 ST7LQ8TDW4 575 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 RNF133Q8WVZ7 376 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 MAP6Q96JE9 813 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 COG8Q96MW5 612 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 JAM3Q9BX67 310 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 C1QTNF6Q9BXI9 259 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 WNT5BQ9H1J7 359 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 ELOVL3Q9HB03 270 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 CDH20Q9HBT6 801 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 DDX28Q9NUL7 540 aaKnown RBP12.43□□□□□ -0.42
SKA2-205ENST00000580541 IKZF2Q9UKS7 526 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 ERGIC3Q9Y282 383 aa12.43□□□□□ -0.42
SKA2-205ENST00000580541 UBR5O95071 2799 aaPredicted RBP12.42□□□□□ -0.42
SKA2-205ENST00000580541 A0A1W2PQL4 384 aaPredicted RBP12.42□□□□□ -0.42
SKA2-205ENST00000580541 J3QRE1 110 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 SYNGR3O43761 229 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 IGHA1P01876 353 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 THBDP07204 575 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 COX6B1P14854 86 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 TUBG1P23258 451 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 CRHBPP24387 322 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 DCTDP32321 178 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 RPS27P42677 84 aaKnown RBP12.42□□□□□ -0.42
SKA2-205ENST00000580541 RAD52P43351 418 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 RGS6P49758 472 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 RIDAP52758 137 aaKnown RBP12.42□□□□□ -0.42
SKA2-205ENST00000580541 HCCSP53701 268 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 ROM1Q03395 351 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 MRPL28Q13084 256 aaKnown RBP12.42□□□□□ -0.42
SKA2-205ENST00000580541 GALEQ14376 348 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 DAZAP2Q15038 168 aaPredicted RBP12.42□□□□□ -0.42
SKA2-205ENST00000580541 LAIR2Q6ISS4 152 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 ZNF544Q6NX49 715 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms