RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 NME2P1O60361 137 aa18■□□□□ 0.47
SMG8-203ENST00000578922 ATF1P18846 271 aa18■□□□□ 0.47
SMG8-203ENST00000578922 NME2P22392 152 aa18■□□□□ 0.47
SMG8-203ENST00000578922 CSNK2A1P68400 391 aaPredicted RBP18■□□□□ 0.47
SMG8-203ENST00000578922 CEP78Q5JTW2 689 aa18■□□□□ 0.47
SMG8-203ENST00000578922 GGNQ86UU5 652 aa18■□□□□ 0.47
SMG8-203ENST00000578922 CDC20BQ86Y33 519 aa18■□□□□ 0.47
SMG8-203ENST00000578922 KCNE4Q8WWG9 221 aa18■□□□□ 0.47
SMG8-203ENST00000578922 OR51J1Q9H342 316 aa18■□□□□ 0.47
SMG8-203ENST00000578922 MRPL22Q9NWU5 206 aaKnown RBP18■□□□□ 0.47
SMG8-203ENST00000578922 LAMP5Q9UJQ1 280 aa18■□□□□ 0.47
SMG8-203ENST00000578922 CACNA1CQ13936 2221 aa18■□□□□ 0.47
SMG8-203ENST00000578922 URB1O60287 2271 aaKnown RBP18■□□□□ 0.47
SMG8-203ENST00000578922 NPIPB13A6NJU9 1138 aa18■□□□□ 0.47
SMG8-203ENST00000578922 NPIPB4C9JG80 1138 aa18■□□□□ 0.47
SMG8-203ENST00000578922 ANXA3P12429 323 aa18■□□□□ 0.47
SMG8-203ENST00000578922 CRABP1P29762 137 aa18■□□□□ 0.47
SMG8-203ENST00000578922 H3F3AP84243 136 aa18■□□□□ 0.47
SMG8-203ENST00000578922 HSF2Q03933 536 aa18■□□□□ 0.47
SMG8-203ENST00000578922 OR5H6Q8NGV6 325 aa18■□□□□ 0.47
SMG8-203ENST00000578922 ANGPTL6Q8NI99 470 aa18■□□□□ 0.47
SMG8-203ENST00000578922 THEM6Q8WUY1 208 aa18■□□□□ 0.47
SMG8-203ENST00000578922 PHF21AQ96BD5 680 aa18■□□□□ 0.47
SMG8-203ENST00000578922 KCNG2Q9UJ96 466 aa18■□□□□ 0.47
SMG8-203ENST00000578922 KLF13Q9Y2Y9 288 aaPredicted RBP18■□□□□ 0.47
SMG8-203ENST00000578922 ZNF879B4DU55 563 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 SMLR1H3BR10 107 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 ZNF593O00488 134 aaPredicted RBP17.99■□□□□ 0.47
SMG8-203ENST00000578922 SPARCP09486 303 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 OR8G3PP0DMU2 310 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 CD46P15529 392 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 EIF1AXP47813 144 aaKnown RBP17.99■□□□□ 0.47
SMG8-203ENST00000578922 CLDN17P56750 224 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 SOX8P57073 446 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 CLRN1P58418 232 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 UNQ9370/PRO34162Q6UXP9 181 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 LRRC69Q6ZNQ3 347 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.99■□□□□ 0.47
SMG8-203ENST00000578922 SIAH3Q8IW03 269 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 TMEM251Q8N6I4 163 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 HSD17B8Q92506 261 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 ZNF775Q96BV0 537 aaPredicted RBP17.99■□□□□ 0.47
SMG8-203ENST00000578922 CACNG6Q9BXT2 260 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 SLC6A15Q9H2J7 730 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 BRD7Q9NPI1 651 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 EMC3Q9P0I2 261 aa17.99■□□□□ 0.47
SMG8-203ENST00000578922 TRAV6A0A075B6T7 132 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 A0A1B0GVC2 190 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 A6NIN4 97 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 CXCL13O43927 109 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 EIF1BO60739 113 aaKnown RBP17.98■□□□□ 0.47
SMG8-203ENST00000578922 SRP9P49458 86 aaKnown RBP17.98■□□□□ 0.47
SMG8-203ENST00000578922 GFRA1P56159 465 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 CARD18P57730 90 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 SNRPD2P62316 118 aaKnown RBP17.98■□□□□ 0.47
SMG8-203ENST00000578922 ADAM8P78325 824 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 RIPPLY1Q0D2K3 151 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 LUZP2Q86TE4 346 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 DTX3Q8N9I9 347 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 GPR137Q96N19 417 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 AMELYQ99218 206 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 FRYQ5TBA9 3013 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 TRBV2A0A0J9YWF9 115 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 ZNF891A8MT65 544 aaPredicted RBP17.98■□□□□ 0.47
SMG8-203ENST00000578922 KLK10O43240 276 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 RPP14O95059 124 aaKnown RBP17.98■□□□□ 0.47
SMG8-203ENST00000578922 RPS11P62280 158 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMG8-203ENST00000578922 GLO1Q04760 184 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 ZNF766Q5HY98 468 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 UBE2NLQ5JXB2 153 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 BTN2A1Q7KYR7 527 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 OR13C5Q8NGS8 318 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 NAA11Q9BSU3 229 aaPredicted RBP17.98■□□□□ 0.47
SMG8-203ENST00000578922 B3GNT2Q9NY97 397 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 IKZF2Q9UKS7 526 aa17.98■□□□□ 0.47
SMG8-203ENST00000578922 MRPS18CQ9Y3D5 142 aaKnown RBP17.98■□□□□ 0.47
SMG8-203ENST00000578922 A0A1B0GVI7 797 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 KLRC4-KLRK1H3BQV0 150 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 PDCD5O14737 125 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 EFSO43281 561 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 IGHG1P01857 330 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 CD3GP09693 182 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 SNRPBP14678 240 aaKnown RBP17.97■□□□□ 0.47
SMG8-203ENST00000578922 GIFP27352 417 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 CLDN15P56746 228 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 DGCR2P98153 550 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 SRYQ05066 204 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 ZNF239Q16600 458 aaKnown RBP17.97■□□□□ 0.47
SMG8-203ENST00000578922 OR11H7Q8NGC8 314 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 OR10D3Q8NH80 312 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 ZNF431Q8TF32 576 aaPredicted RBP17.97■□□□□ 0.47
SMG8-203ENST00000578922 SMIM4Q8WVI0 70 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 ROBO4Q8WZ75 1007 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 HAS2Q92819 552 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 SLC25A44Q96H78 314 aaPredicted RBP17.97■□□□□ 0.47
SMG8-203ENST00000578922 ZNF385AQ96PM9 386 aaKnown RBP17.97■□□□□ 0.47
SMG8-203ENST00000578922 RBP7Q96R05 134 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 MRPL13Q9BYD1 178 aaKnown RBP17.97■□□□□ 0.47
SMG8-203ENST00000578922 ZNF726A6NNF4 738 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 NPIPA2E9PIF3 369 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms