RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 SYT14Q8NB59 555 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 ZNF485Q8NCK3 441 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 OR6X1Q8NH79 312 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 OR2V1Q8NHB1 315 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 MCFD2Q8NI22 146 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 DYNC2LI1Q8TCX1 351 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 THEM6Q8WUY1 208 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 TMEM203Q969S6 136 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 PERPQ96FX8 193 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 CENPOQ9BU64 300 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 TMED9Q9BVK6 235 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 SF3B5Q9BWJ5 86 aaKnown RBP8.97□□□□□ -0.97
SS18-210ENST00000578700 CDADC1Q9BWV3 514 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 MED29Q9NX70 200 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 PAQR5Q9NXK6 330 aaPredicted RBP8.97□□□□□ -0.97
SS18-210ENST00000578700 GALNT8Q9NY28 637 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 CCDC59Q9P031 241 aaKnown RBP8.97□□□□□ -0.97
SS18-210ENST00000578700 IKZF2Q9UKS7 526 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 KIAA1549Q9HCM3 1950 aa8.97□□□□□ -0.97
SS18-210ENST00000578700 IGLV1-36A0A0B4J1U3 117 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 VGLL3A8MV65 326 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 TNFSF11O14788 317 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 GPRIN2O60269 458 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 GPX5O75715 221 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 SULT1C4O75897 302 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 SYNGR4O95473 234 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 SPARCP09486 303 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 TMIGD3P0DMS9 266 aaPredicted RBP8.96□□□□□ -0.98
SS18-210ENST00000578700 EDNRAP25101 427 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 SHC1P29353 583 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 OPRM1P35372 400 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 CRYBB2P43320 205 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 ENTPD1P49961 510 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 RORCP51449 518 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 OR12D2P58182 307 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 B3GALT5-AS1P59052 145 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 SIRPAP78324 504 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 ROR2Q01974 943 aaKnown RBP8.96□□□□□ -0.98
SS18-210ENST00000578700 EGR3Q06889 387 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 SF3B4Q15427 424 aaKnown RBP eCLIP8.96□□□□□ -0.984e-8■■■□□ 18.5
SS18-210ENST00000578700 ZNF404Q494X3 552 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 NSUN5P2Q63ZY6 315 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 ARL9Q6T311 187 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 CHMP1BQ7LBR1 199 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 GLB1L2Q8IW92 636 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 TIGD4Q8IY51 512 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 UBQLNLQ8IYU4 475 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 ZFP41Q8N8Y5 198 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 C9orf106Q8NAJ2 232 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 NOXO1Q8NFA2 376 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 OR6N1Q8NGY5 312 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 S100ZQ8WXG8 99 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 AP3S1Q92572 193 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 CPNE4Q96A23 557 aaPredicted RBP8.96□□□□□ -0.98
SS18-210ENST00000578700 INTS12Q96CB8 462 aaKnown RBP8.96□□□□□ -0.98
SS18-210ENST00000578700 TXNDC15Q96J42 360 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 COX4I2Q96KJ9 171 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 DACH2Q96NX9 599 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 KCNK17Q96T54 332 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 ZNF649Q9BS31 505 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 MMP27Q9H306 513 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 MARCH7Q9H992 704 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 UBTD1Q9HAC8 227 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 HMG20AQ9NP66 347 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 TXNL4BQ9NX01 149 aaKnown RBP8.96□□□□□ -0.98
SS18-210ENST00000578700 CRNNQ9UBG3 495 aaPredicted RBP8.96□□□□□ -0.98
SS18-210ENST00000578700 A3GALT2U3KPV4 340 aa8.96□□□□□ -0.98
SS18-210ENST00000578700 EXPH5Q8NEV8 1989 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 A0A0J9YW62 118 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 TRBV2A0A0J9YWF9 115 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 A0A1W2PPL8 197 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 SLC35F4A4IF30 521 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 DCTN6O00399 190 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 ZNF593O00488 134 aaPredicted RBP8.95□□□□□ -0.98
SS18-210ENST00000578700 PLPP2O43688 288 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 GOSR1O95249 250 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 ACTL6AO96019 429 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 IL1AP01583 271 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 CD1AP06126 327 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 CTLA4P16410 223 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 FGF9P31371 208 aaPredicted RBP8.95□□□□□ -0.98
SS18-210ENST00000578700 CD79BP40259 229 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 EIF1AXP47813 144 aaKnown RBP8.95□□□□□ -0.98
SS18-210ENST00000578700 CSNK1A1P48729 337 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 TGM4P49221 684 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 HCCSP53701 268 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 CLDN17P56750 224 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 RPS25P62851 125 aaKnown RBP8.95□□□□□ -0.98
SS18-210ENST00000578700 H3F3AP84243 136 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 SORDQ00796 357 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 SRYQ05066 204 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 SLC3A1Q07837 685 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 FOXF2Q12947 444 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 C22orf42Q6IC83 251 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 PLXDC2Q6UX71 529 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 DPY19L4Q7Z388 723 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 KRT77Q7Z794 578 aa8.95□□□□□ -0.98
SS18-210ENST00000578700 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.95□□□□□ -0.98
SS18-210ENST00000578700 OR9K2Q8NGE7 335 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms