RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 CCNOP22674 350 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 APLNRP35414 380 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 PEX19P40855 299 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 SLC15A1P46059 708 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 CSNK2BP67870 215 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 ACTC1P68032 377 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 ACTA1P68133 377 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 HIST1H3AP68431 136 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 TAF13Q15543 124 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 RBM48Q5RL73 367 aaKnown RBP10.55□□□□□ -0.72
IFT20-207ENST00000578547 HIST2H3PS2Q5TEC6 136 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 LRRN1Q6UXK5 716 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 HIST2H3AQ71DI3 136 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 SSX6Q7RTT6 188 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 ZNF584Q8IVC4 421 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 ALDH16A1Q8IZ83 802 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 STX19Q8N4C7 294 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 ACBD7Q8N6N7 88 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 CPEB3Q8NE35 698 aaKnown RBP10.55□□□□□ -0.72
IFT20-207ENST00000578547 SLC30A7Q8NEW0 376 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 OR10S1Q8NGN2 331 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 OR2T27Q8NH04 317 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 OR1F12Q8NHA8 337 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 SLC7A6Q92536 515 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 GGHQ92820 318 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 ATF6BQ99941 703 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 SPOCK3Q9BQ16 436 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 HDHD2Q9H0R4 259 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 MOV10Q9HCE1 1003 aaKnown RBP10.55□□□□□ -0.72
IFT20-207ENST00000578547 NGBQ9NPG2 151 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 PLCXD1Q9NUJ7 323 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 PAK1IP1Q9NWT1 392 aaPredicted RBP10.55□□□□□ -0.72
IFT20-207ENST00000578547 IKZF2Q9UKS7 526 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 FBXL3Q9UKT7 428 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 LRCH1Q9Y2L9 728 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 TPRKBQ9Y3C4 175 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 PCDHGB1Q9Y5G3 927 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 PRR14LQ5THK1 2151 aa10.55□□□□□ -0.72
IFT20-207ENST00000578547 ANKHD1Q8IWZ3 2542 aaKnown RBP10.54□□□□□ -0.72
IFT20-207ENST00000578547 C5orf49A4QMS7 147 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 OR6C6A6NF89 314 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 PRR32B1ATL7 298 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 ZNF878C9JN71 531 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 PHYHO14832 338 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 MAGEB4O15481 346 aaPredicted RBP10.54□□□□□ -0.72
IFT20-207ENST00000578547 SYNGR3O43761 229 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 PTHP01270 115 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 IGKV3-15P01624 115 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 IGLV1-44P01699 117 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 SERPINA5P05154 406 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 DBHP09172 617 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 H2BFMP0C1H6 154 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 CCDC159P0C7I6 412 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 MYL12AP19105 171 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 ALOX5APP20292 161 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 CRYGSP22914 178 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 CRHBPP24387 322 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 EEF1B2P24534 225 aaKnown RBP10.54□□□□□ -0.72
IFT20-207ENST00000578547 STOMP27105 288 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 HSD11B1P28845 292 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 GDI2P50395 445 aaKnown RBP10.54□□□□□ -0.72
IFT20-207ENST00000578547 MVKQ03426 396 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 SPOCK1Q08629 439 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 ST3GAL4Q11206 333 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 PTPN13Q12923 2485 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 TBC1D28Q2M2D7 210 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 C1QTNF12Q5T7M4 302 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 HIST2H2BCQ6DN03 193 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 KCTD18Q6PI47 426 aaPredicted RBP10.54□□□□□ -0.72
IFT20-207ENST00000578547 ZNF322Q6U7Q0 402 aaPredicted RBP10.54□□□□□ -0.72
IFT20-207ENST00000578547 TMEM108Q6UXF1 575 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 SSX8Q7RTT4 187 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 KRT77Q7Z794 578 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 LHFPL3Q86UP9 236 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 ADGRG4Q8IZF6 3080 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 FAM222BQ8WU58 562 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 SNX33Q8WV41 574 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 ASB17Q8WXJ9 295 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 SGCDQ92629 289 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 TMEM80Q96HE8 168 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 ZNF75AQ96N20 296 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 MNTQ99583 582 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 KCNS3Q9BQ31 491 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 PNRC2Q9NPJ4 139 aaKnown RBP10.54□□□□□ -0.72
IFT20-207ENST00000578547 MRPS18AQ9NVS2 196 aaKnown RBP10.54□□□□□ -0.72
IFT20-207ENST00000578547 SLCO1C1Q9NYB5 712 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 CNOT2Q9NZN8 540 aaKnown RBP10.54□□□□□ -0.72
IFT20-207ENST00000578547 ERVK-18Q9QC07 812 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 BLOC1S6Q9UL45 172 aa10.54□□□□□ -0.72
IFT20-207ENST00000578547 LOC100509620A0A075B734 347 aa10.53□□□□□ -0.72
IFT20-207ENST00000578547 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
IFT20-207ENST00000578547 F5H5K5 113 aa10.53□□□□□ -0.72
IFT20-207ENST00000578547 J3QRE1 110 aa10.53□□□□□ -0.72
IFT20-207ENST00000578547 IGHA1P01876 353 aa10.53□□□□□ -0.72
IFT20-207ENST00000578547 ADRA2AP08913 450 aa10.53□□□□□ -0.72
IFT20-207ENST00000578547 EPXP11678 715 aa10.53□□□□□ -0.72
IFT20-207ENST00000578547 PIPP12273 146 aaPredicted RBP10.53□□□□□ -0.72
IFT20-207ENST00000578547 COX6B1P14854 86 aa10.53□□□□□ -0.72
IFT20-207ENST00000578547 PAX7P23759 505 aa10.53□□□□□ -0.72
IFT20-207ENST00000578547 CD40P25942 277 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms