RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 DPPA2Q7Z7J5 298 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 MRGPRGQ86SM5 289 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 STX19Q8N4C7 294 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 SLC22A24Q8N4F4 322 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 OR4F15Q8NGB8 312 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 OR51G2Q8NGK0 314 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 OTOSQ8NHW6 89 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ALKBH3Q96Q83 286 aaPredicted RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 JMJD8Q96S16 334 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 INTS14Q96SY0 518 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 WDR76Q9H967 626 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 SEC61A2Q9H9S3 476 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 COMMD3-BMI1R4GMX3 469 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ZNF462Q96JM2 2506 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 GTF3C1Q12789 2109 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 A0A087WXM4 84 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 C12orf71A8MTZ7 269 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 VSTM5A8MXK1 200 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 PHYHO14832 338 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 RGS10O43665 173 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 FARS2O95363 451 aaKnown RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 RAB36O95755 333 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 HLA-DQA2P01906 255 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ITGA5P08648 1049 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 PSMB1P20618 241 aaKnown RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 AGAP20933 346 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 IGHV1-2P23083 117 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 PAX7P23759 505 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 EEF1B2P24534 225 aaKnown RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 CHRNB4P30926 498 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 CDAP32320 146 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 HIST1H3AP68431 136 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ARF1P84077 181 aaKnown RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 ROM1Q03395 351 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 IRF3Q14653 427 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 IGFBP7Q16270 282 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 FBXL19-AS1Q494R0 122 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 HIST2H3PS2Q5TEC6 136 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 OR7E24Q6IFN5 339 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ZNF773Q6PK81 442 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 DEGS2Q6QHC5 323 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ZNF474Q6S9Z5 364 aaPredicted RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 ZNF813Q6ZN06 617 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 AHSA2Q719I0 299 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 HIST2H3AQ71DI3 136 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 DPY19L4Q7Z388 723 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 KCTD20Q7Z5Y7 419 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 CDC20BQ86Y33 519 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 LIX1LQ8IVB5 337 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ZNF433Q8N7K0 673 aaPredicted RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 TSPAN14Q8NG11 270 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 LILRB4Q8NHJ6 448 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ASB5Q8WWX0 329 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 ASB17Q8WXJ9 295 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 BCL2L2Q92843 193 aaPredicted RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 OR10A4Q9H209 315 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 CHCHD3Q9NX63 227 aaKnown RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 ELOVL5Q9NYP7 299 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 COQ3Q9NZJ6 369 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 SH3BGRL2Q9UJC5 107 aa7.01□□□□□ -1.29
COPS3-215ENST00000578317 EXOSC1Q9Y3B2 195 aaKnown RBP7.01□□□□□ -1.29
COPS3-215ENST00000578317 ADGRG4Q8IZF6 3080 aa7□□□□□ -1.29
COPS3-215ENST00000578317 SHANK1Q9Y566 2161 aa7□□□□□ -1.29
COPS3-215ENST00000578317 A0A1W2PPL8 197 aa7□□□□□ -1.29
COPS3-215ENST00000578317 A0A1W2PQL4 384 aaPredicted RBP7□□□□□ -1.29
COPS3-215ENST00000578317 TMEM129A0AVI4 362 aa7□□□□□ -1.29
COPS3-215ENST00000578317 TVP23AA6NH52 213 aa7□□□□□ -1.29
COPS3-215ENST00000578317 LRRTM2O43300 516 aa7□□□□□ -1.29
COPS3-215ENST00000578317 SELENOFO60613 162 aa7□□□□□ -1.29
COPS3-215ENST00000578317 SULT1C4O75897 302 aa7□□□□□ -1.29
COPS3-215ENST00000578317 GPANK1O95872 356 aa7□□□□□ -1.29
COPS3-215ENST00000578317 HTR1AP08908 422 aa7□□□□□ -1.29
COPS3-215ENST00000578317 LIMS3P0CW19 117 aa7□□□□□ -1.29
COPS3-215ENST00000578317 LIMS4P0CW20 117 aa7□□□□□ -1.29
COPS3-215ENST00000578317 BMP5P22003 454 aa7□□□□□ -1.29
COPS3-215ENST00000578317 GNLYP22749 145 aa7□□□□□ -1.29
COPS3-215ENST00000578317 CD40P25942 277 aa7□□□□□ -1.29
COPS3-215ENST00000578317 CAPZA2P47755 286 aa7□□□□□ -1.29
COPS3-215ENST00000578317 FOXG1P55316 489 aaPredicted RBP7□□□□□ -1.29
COPS3-215ENST00000578317 PCBD1P61457 104 aa7□□□□□ -1.29
COPS3-215ENST00000578317 ADAM8P78325 824 aa7□□□□□ -1.29
COPS3-215ENST00000578317 MVKQ03426 396 aa7□□□□□ -1.29
COPS3-215ENST00000578317 ENDOGQ14249 297 aaKnown RBP7□□□□□ -1.29
COPS3-215ENST00000578317 GALEQ14376 348 aa7□□□□□ -1.29
COPS3-215ENST00000578317 GABRA6Q16445 453 aa7□□□□□ -1.29
COPS3-215ENST00000578317 SGCAQ16586 387 aa7□□□□□ -1.29
COPS3-215ENST00000578317 MSMPQ1L6U9 139 aa7□□□□□ -1.29
COPS3-215ENST00000578317 SLC25A35Q3KQZ1 300 aa7□□□□□ -1.29
COPS3-215ENST00000578317 ZNF684Q5T5D7 378 aa7□□□□□ -1.29
COPS3-215ENST00000578317 SLC18B1Q6NT16 456 aa7□□□□□ -1.29
COPS3-215ENST00000578317 SSX8Q7RTT4 187 aa7□□□□□ -1.29
COPS3-215ENST00000578317 P2RY8Q86VZ1 359 aa7□□□□□ -1.29
COPS3-215ENST00000578317 ERI1Q8IV48 349 aaKnown RBP7□□□□□ -1.29
COPS3-215ENST00000578317 SKA3Q8IX90 412 aa7□□□□□ -1.29
COPS3-215ENST00000578317 SLC35F2Q8IXU6 374 aa7□□□□□ -1.29
COPS3-215ENST00000578317 SPARTQ8N0X7 666 aa7□□□□□ -1.29
COPS3-215ENST00000578317 C17orf78Q8N4C9 275 aa7□□□□□ -1.29
COPS3-215ENST00000578317 GJC3Q8NFK1 279 aa7□□□□□ -1.29
COPS3-215ENST00000578317 OR10H5Q8NGA6 315 aa7□□□□□ -1.29
COPS3-215ENST00000578317 OR1K1Q8NGR3 316 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms