RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 DNM1P34Q6PK57 102 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 TBPL2Q6SJ96 375 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 FBXW12Q6X9E4 464 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 IGFN1Q86VF2 1251 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 ICA1LQ8NDH6 482 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 OR5L1Q8NGL2 311 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 ZNF418Q8TF45 676 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 HDHD2Q9H0R4 259 aa12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 PURGQ9UJV8 347 aaKnown RBP12.28□□□□□ -0.44
SMARCE1-213ENST00000578044 DOK2O60496 412 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 FOXH1O75593 365 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 SEMG1P04279 462 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 SCG5P05408 212 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 ADRA2CP18825 462 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 HTR5AP47898 357 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 HILS1P60008 231 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 KRT72Q14CN4 511 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 TSTQ16762 297 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 ALKBH6Q3KRA9 238 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 SMARCD3Q6STE5 483 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 RINLQ6ZS11 566 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 COLCA1Q6ZS62 124 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 SPICQ8N5J4 248 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 GJC3Q8NFK1 279 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 NANPQ8TBE9 248 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 CCL17Q92583 94 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 RASD2Q96D21 266 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 RSRC1Q96IZ7 334 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 COQ7Q99807 217 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 TMPRSS13Q9BYE2 586 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 METTL17Q9H7H0 456 aaPredicted RBP12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 PLEK2Q9NYT0 353 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 MAGEL2Q9UJ55 1249 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 NPTNQ9Y639 398 aa12.27□□□□□ -0.45
SMARCE1-213ENST00000578044 A8MXK9 166 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 SPRY3O43610 288 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 TIMM8AO60220 97 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 SNX3O60493 162 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 FSHBP01225 129 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 IGHV2-70P01814 119 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 FPR3P25089 353 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 IFNGR2P38484 337 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 FXYD6P3P58550 94 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 TNFAIP6P98066 277 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 MVKQ03426 396 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 COX10Q12887 443 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 ECH1Q13011 328 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 ZNF181Q2M3W8 571 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 KRTAP27-1Q3LI81 207 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 SPATA46Q5T0L3 261 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 C1orf229Q6ZS94 237 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 LRRC28Q86X40 367 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 OR1F12Q8NHA8 337 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 FAM216AQ8WUB2 273 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 POP5Q969H6 163 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 APOBEC3DQ96AK3 386 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 PYURFQ96I23 114 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 FAM46AQ96IP4 442 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 GAL3ST1Q99999 423 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 SYT4Q9H2B2 425 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 GMPR2Q9P2T1 348 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 KCNG2Q9UJ96 466 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 AURKCQ9UQB9 309 aa12.26□□□□□ -0.45
SMARCE1-213ENST00000578044 TRBV4-1A0A0J9YWV2 114 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 UNC119BA6NIH7 251 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 SLC16A7O60669 478 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 PPIAL4GP0DN37 164 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 HMGA2P52926 109 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 GLO1Q04760 184 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 RFX4Q33E94 735 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 FGD3Q5JSP0 725 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 SAMD4BQ5PRF9 694 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 DCAF12L2Q5VW00 463 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 FAHD2BQ6P2I3 314 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 THSD4Q6ZMP0 1018 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 ZBTB46Q86UZ6 589 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 PGAM4Q8N0Y7 254 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 LINC00471Q8N535 108 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 GTF3AQ92664 365 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 FAHD2AQ96GK7 314 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 SUCNR1Q9BXA5 334 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 NUAK2Q9H093 628 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 NSRP1Q9H0G5 558 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 NARFLQ9H6Q4 476 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 EMC7Q9NPA0 242 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 IL1RAPQ9NPH3 570 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 TMEM106BQ9NUM4 274 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 NDE1Q9NXR1 346 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 ASH2LQ9UBL3 628 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 CD300AQ9UGN4 299 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 PCDHB10Q9UN67 800 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 CACNG2Q9Y698 323 aa12.25□□□□□ -0.45
SMARCE1-213ENST00000578044 IGLV1-36A0A0B4J1U3 117 aa12.24□□□□□ -0.45
SMARCE1-213ENST00000578044 KRT36O76013 467 aa12.24□□□□□ -0.45
SMARCE1-213ENST00000578044 NCK1P16333 377 aa12.24□□□□□ -0.45
SMARCE1-213ENST00000578044 SELEP16581 610 aa12.24□□□□□ -0.45
SMARCE1-213ENST00000578044 EPHA1P21709 976 aa12.24□□□□□ -0.45
SMARCE1-213ENST00000578044 SLC6A6P31641 620 aa12.24□□□□□ -0.45
SMARCE1-213ENST00000578044 CDKN2AP42771 156 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-213ENST00000578044 SEC23BQ15437 767 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms