RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TMIGD2Q96BF3 282 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 FAM3DQ96BQ1 224 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 DNAJC19Q96DA6 116 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 PIK3IP1Q96FE7 263 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 C9orf72Q96LT7 481 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 P2RX4Q99571 388 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 CHID1Q9BWS9 393 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 MRPL37Q9BZE1 423 aaKnown RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 IL22Q9GZX6 179 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 IFI27L2Q9H2X8 130 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 SRMSQ9H3Y6 488 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 UBE2ZQ9H832 354 aaPredicted RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 ZNF331Q9NQX6 463 aaPredicted RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 ADA2Q9NZK5 511 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 DEC1Q9P2X7 70 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 XCL2Q9UBD3 114 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 OR12D3Q9UGF7 316 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 CFAP45Q9UL16 551 aa1.67□□□□□ -2.14
COPS3-213ENST00000577210 YARS2Q9Y2Z4 477 aaKnown RBP1.67□□□□□ -2.14
COPS3-213ENST00000577210 IGLV11-55A0A075B6I3 123 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 LYRM9A8MSI8 78 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 KRTAP4-16G5E9R7 235 aaPredicted RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 ENTPD5O75356 428 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 RDH16O75452 317 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 SRP72O76094 671 aaKnown RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 PTTG1O95997 202 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 MOSP00540 346 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 IGKV3-11P04433 115 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 GNAO1P09471 354 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 HOXB8P17481 243 aaPredicted RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 PSMC3P17980 439 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 GABRR2P28476 465 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 MAS1LP35410 378 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 GPX4P36969 197 aaPredicted RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 CFHR2P36980 270 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 NMUP48645 174 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 FGF8P55075 233 aaPredicted RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 CLDN18P56856 261 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 KRTAP12-2P59991 146 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 ATP6V0D1P61421 351 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 TNNC1P63316 161 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 SEMG2Q02383 582 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 TCP10Q12799 353 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 CDH17Q12864 832 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 GPNMBQ14956 572 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 GUCA2BQ16661 112 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 VAX1Q5SQQ9 334 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 TSPO2Q5TGU0 170 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 SPECC1LQ69YQ0 1117 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 H3F3CQ6NXT2 135 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 ZNF621Q6ZSS3 439 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 TMEM179Q6ZVK1 233 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 NCCRP1Q6ZVX7 275 aaPredicted RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 FAM122BQ7Z309 247 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 MRPL55Q7Z7F7 128 aaKnown RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 TMEM150AQ86TG1 271 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 ARHGAP18Q8N392 663 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 ZNF786Q8N393 782 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 TCAIMQ8N3R3 496 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 ARRDC1Q8N5I2 433 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 FAM86B1Q8N7N1 296 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 DUSP18Q8NEJ0 188 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 NPBQ8NG41 125 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 OR10R2Q8NGX6 335 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 OR8K3Q8NH51 312 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 OR51F2Q8NH61 342 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 LKAAEAR1Q8TD35 194 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 SRSF12Q8WXF0 261 aaKnown RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 NAT6Q93015 286 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 COL21A1Q96P44 957 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 ZNF317Q96PQ6 595 aaPredicted RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 HINT2Q9BX68 163 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 PARP12Q9H0J9 701 aaKnown RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 DEFB127Q9H1M4 99 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 TMEM38AQ9H6F2 299 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 TDRD3Q9H7E2 651 aaKnown RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 CCL28Q9NRJ3 127 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 SLC25A37Q9NYZ2 338 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 PCYOX1Q9UHG3 505 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 KLK12Q9UKR0 248 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 WSB1Q9Y6I7 421 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 CARMIL3Q8ND23 1372 aa1.66□□□□□ -2.14
COPS3-213ENST00000577210 EIF4G1Q04637 1599 aaKnown RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 COL16A1Q07092 1604 aaPredicted RBP1.66□□□□□ -2.14
COPS3-213ENST00000577210 IGLV4-69A0A075B6H9 119 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 IGLV4-60A0A075B6I1 120 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.65□□□□□ -2.15
COPS3-213ENST00000577210 IGHV3-64DA0A0J9YX35 117 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 RAB19A4D1S5 217 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 H7C0C1 242 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 M0QX08 132 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 PSMD11O00231 422 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 NME4O00746 187 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 SCAMP2O15127 329 aaKnown RBP1.65□□□□□ -2.15
COPS3-213ENST00000577210 XRCC2O43543 280 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 MPDU1O75352 247 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 SPAG7O75391 227 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 TDP2O95551 362 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 NPPAP01160 153 aa1.65□□□□□ -2.15
COPS3-213ENST00000577210 OXTP01178 125 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms