RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TPK1Q9H3S4 243 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 TUBG2Q9NRH3 451 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 TBCCD1Q9NVR7 557 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 KCNG2Q9UJ96 466 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 LHFPL6Q9Y693 200 aa20.14■□□□□ 0.81
SNF8-217ENST00000576353 OR6C6A6NF89 314 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 RIIAD1A6NNX1 92 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 H3BSA7 217 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 TIPRLO75663 272 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 CIB2O75838 187 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 IGHV3-13P01766 116 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 MT-ND5P03915 603 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 RIPPLY3P57055 190 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 SHQ1Q6PI26 577 aaKnown RBP20.13■□□□□ 0.81
SNF8-217ENST00000576353 CCDC121Q6ZUS5 278 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 MAPK1IP1LQ8NDC0 245 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 ZNF540Q8NDQ6 660 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 OR2AJ1Q8NGZ0 328 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 SLC25A40Q8TBP6 338 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 PIMREGQ9BSJ6 248 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 RBM4Q9BWF3 364 aaKnown RBP20.13■□□□□ 0.81
SNF8-217ENST00000576353 HDHD2Q9H0R4 259 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 GRIP1Q9Y3R0 1128 aa20.13■□□□□ 0.81
SNF8-217ENST00000576353 NGFP01138 241 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 ZNF823P16415 610 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 ZNF3P17036 446 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 PRKACGP22612 351 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 GRK5P34947 590 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 SLC25A1P53007 311 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 DBPQ10586 325 aaPredicted RBP20.12■□□□□ 0.81
SNF8-217ENST00000576353 CRMP1Q14194 572 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 ELFN2Q5R3F8 820 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 SPATA46Q5T0L3 261 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 MBNL2Q5VZF2 373 aaKnown RBP20.12■□□□□ 0.81
SNF8-217ENST00000576353 TMEM154Q6P9G4 183 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 RFPL4BQ6ZWI9 263 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 HS3ST5Q8IZT8 346 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 ATG16L2Q8NAA4 619 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 KLF14Q8TD94 323 aaPredicted RBP20.12■□□□□ 0.81
SNF8-217ENST00000576353 UBASH3BQ8TF42 649 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 IPCEF1Q8WWN9 437 aaPredicted RBP20.12■□□□□ 0.81
SNF8-217ENST00000576353 UTP4Q969X6 686 aaKnown RBP20.12■□□□□ 0.81
SNF8-217ENST00000576353 COG8Q96MW5 612 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 DCLRE1CQ96SD1 692 aaKnown RBP20.12■□□□□ 0.81
SNF8-217ENST00000576353 OR2J1Q9GZK6 312 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 NTN4Q9HB63 628 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 HINT3Q9NQE9 182 aaKnown RBP20.12■□□□□ 0.81
SNF8-217ENST00000576353 CMC2Q9NRP2 79 aa20.12■□□□□ 0.81
SNF8-217ENST00000576353 RTTNQ86VV8 2226 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 NAT2P11245 290 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 OSMP13725 252 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 POU1F1P28069 291 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 PYCR1P32322 319 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 GGT2P36268 569 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 LOXL1Q08397 574 aaPredicted RBP20.11■□□□□ 0.81
SNF8-217ENST00000576353 SLC27A4Q6P1M0 643 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 CORO6Q6QEF8 472 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 Q71RC1 249 aaPredicted RBP20.11■□□□□ 0.81
SNF8-217ENST00000576353 ASRGL1Q7L266 308 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 ZNF786Q8N393 782 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 DNAJC9Q8WXX5 260 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 DUS3LQ96G46 650 aaKnown RBP20.11■□□□□ 0.81
SNF8-217ENST00000576353 COQ7Q99807 217 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 NMNAT2Q9BZQ4 307 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 CYB5R1Q9UHQ9 305 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 AP4S1Q9Y587 144 aa20.11■□□□□ 0.81
SNF8-217ENST00000576353 C17orf100A8MU93 164 aa20.1■□□□□ 0.81
SNF8-217ENST00000576353 J3QW42 95 aa20.1■□□□□ 0.81
SNF8-217ENST00000576353 RGS6P49758 472 aa20.1■□□□□ 0.81
SNF8-217ENST00000576353 BLVRAP53004 296 aa20.1■□□□□ 0.81
SNF8-217ENST00000576353 ECH1Q13011 328 aa20.1■□□□□ 0.81
SNF8-217ENST00000576353 PCGF3Q3KNV8 242 aa20.1■□□□□ 0.81
SNF8-217ENST00000576353 ALKBH6Q3KRA9 238 aa20.1■□□□□ 0.81
SNF8-217ENST00000576353 SLC18B1Q6NT16 456 aa20.1■□□□□ 0.81
SNF8-217ENST00000576353 LINC00346Q8IVM7 164 aa20.1■□□□□ 0.81
SNF8-217ENST00000576353 OR9Q1Q8NGQ5 310 aa20.1■□□□□ 0.81
SNF8-217ENST00000576353 MRPL22Q9NWU5 206 aaKnown RBP20.1■□□□□ 0.81
SNF8-217ENST00000576353 A0A096LNT2 108 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 PLSCR5A0PG75 271 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 VWC2LB2RUY7 222 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 USF1P22415 310 aaPredicted RBP20.09■□□□□ 0.81
SNF8-217ENST00000576353 FASP25445 335 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 FMO3P31513 532 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 LIPAP38571 399 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 MPV17P39210 176 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 NR4A2P43354 598 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 CCNIQ14094 377 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 GINS1Q14691 196 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 ATP6AP1Q15904 470 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 IQCF1Q8N6M8 205 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 OR51L1Q8NGJ5 315 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 OR5K1Q8NHB7 308 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 SLC7A6Q92536 515 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 PITX2Q99697 317 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 TEX12Q9BXU0 123 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 CYSLTR2Q9NS75 346 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 NKIRAS2Q9NYR9 191 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 KIF17Q9P2E2 1029 aa20.09■□□□□ 0.81
SNF8-217ENST00000576353 EBAG9O00559 213 aa20.08■□□□□ 0.81
SNF8-217ENST00000576353 HMGN1P05114 100 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms