RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 COX10Q12887 443 aa23.74■■□□□ 1.39
SCARF1-207ENST00000573867 CCNIQ14094 377 aa23.74■■□□□ 1.39
SCARF1-207ENST00000573867 OR9Q1Q8NGQ5 310 aa23.74■■□□□ 1.39
SCARF1-207ENST00000573867 IPCEF1Q8WWN9 437 aaPredicted RBP23.74■■□□□ 1.39
SCARF1-207ENST00000573867 UTP4Q969X6 686 aaKnown RBP23.74■■□□□ 1.39
SCARF1-207ENST00000573867 RBM4Q9BWF3 364 aaKnown RBP23.74■■□□□ 1.39
SCARF1-207ENST00000573867 TLN2Q9Y4G6 2542 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 LYNX1G3V0Z9 82 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 NCR1O76036 304 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 LYNX1P0DP58 116 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 PSKH1P11801 424 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 DAOP14920 347 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 SLC25A16P16260 332 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 GGT2P36268 569 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 CARTPTQ16568 116 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 CFAP77Q6ZQR2 320 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 LINC00346Q8IVM7 164 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 OR51L1Q8NGJ5 315 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 OR1F12Q8NHA8 337 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 NMNAT2Q9BZQ4 307 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 MMADHCQ9H3L0 296 aaPredicted RBP23.73■■□□□ 1.39
SCARF1-207ENST00000573867 MS4A5Q9H3V2 200 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 YY1AP1Q9H869 796 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 BAIAP2Q9UQB8 552 aa23.73■■□□□ 1.39
SCARF1-207ENST00000573867 IGHV3-13P01766 116 aa23.72■■□□□ 1.39
SCARF1-207ENST00000573867 HPXP02790 462 aa23.72■■□□□ 1.39
SCARF1-207ENST00000573867 NKPD1Q17RQ9 610 aa23.72■■□□□ 1.39
SCARF1-207ENST00000573867 ELFN2Q5R3F8 820 aa23.72■■□□□ 1.39
SCARF1-207ENST00000573867 SLC18B1Q6NT16 456 aa23.72■■□□□ 1.39
SCARF1-207ENST00000573867 ASRGL1Q7L266 308 aa23.72■■□□□ 1.39
SCARF1-207ENST00000573867 KLF14Q8TD94 323 aaPredicted RBP23.72■■□□□ 1.39
SCARF1-207ENST00000573867 CHD3Q12873 2000 aaKnown RBP23.72■■□□□ 1.39
SCARF1-207ENST00000573867 LOC390937A0A1W2PQ73 354 aa23.71■■□□□ 1.39
SCARF1-207ENST00000573867 ABHD16AO95870 558 aa23.71■■□□□ 1.39
SCARF1-207ENST00000573867 GYPBP06028 91 aa23.71■■□□□ 1.39
SCARF1-207ENST00000573867 CLUP10909 449 aa23.71■■□□□ 1.39
SCARF1-207ENST00000573867 RIPPLY3P57055 190 aa23.71■■□□□ 1.39
SCARF1-207ENST00000573867 LOXL1Q08397 574 aaPredicted RBP23.71■■□□□ 1.39
SCARF1-207ENST00000573867 RSPO1Q2MKA7 263 aaPredicted RBP23.71■■□□□ 1.39
SCARF1-207ENST00000573867 C1orf146Q5VVC0 180 aa23.71■■□□□ 1.39
SCARF1-207ENST00000573867 MBNL2Q5VZF2 373 aaKnown RBP23.71■■□□□ 1.39
SCARF1-207ENST00000573867 PROKR2Q8NFJ6 384 aa23.71■■□□□ 1.39
SCARF1-207ENST00000573867 TEX47Q8TBZ9 253 aa23.71■■□□□ 1.39
SCARF1-207ENST00000573867 MYOZ1Q9NP98 299 aaPredicted RBP23.71■■□□□ 1.39
SCARF1-207ENST00000573867 CYB5R1Q9UHQ9 305 aa23.71■■□□□ 1.39
SCARF1-207ENST00000573867 KLHL21Q9UJP4 597 aa23.71■■□□□ 1.39
SCARF1-207ENST00000573867 TVP23AA6NH52 213 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 H3BN98 237 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 RPS27P42677 84 aaKnown RBP23.7■■□□□ 1.38
SCARF1-207ENST00000573867 NR4A2P43354 598 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 MAGEB1P43366 347 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 SELENOVP59797 346 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 ZNF718Q3SXZ3 478 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 ACSM5Q6NUN0 579 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 GJC3Q8NFK1 279 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 OR2T4Q8NH00 348 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 UBASH3BQ8TF42 649 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 HCAR1Q9BXC0 346 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 ELOVL3Q9HB03 270 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 PNRC2Q9NPJ4 139 aaKnown RBP23.7■■□□□ 1.38
SCARF1-207ENST00000573867 HINT3Q9NQE9 182 aaKnown RBP23.7■■□□□ 1.38
SCARF1-207ENST00000573867 CMC2Q9NRP2 79 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 TBCCD1Q9NVR7 557 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 SLCO1C1Q9NYB5 712 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 ATPIF1Q9UII2 106 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 STARD10Q9Y365 291 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 GRIP1Q9Y3R0 1128 aa23.7■■□□□ 1.38
SCARF1-207ENST00000573867 FN1P02751 2386 aaKnown RBP23.7■■□□□ 1.38
SCARF1-207ENST00000573867 C17orf100A8MU93 164 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 NDUFS8O00217 210 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 HLA-DQA2P01906 255 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 ERCC1P07992 297 aaPredicted RBP23.69■■□□□ 1.38
SCARF1-207ENST00000573867 HOXB4P17483 251 aaPredicted RBP23.69■■□□□ 1.38
SCARF1-207ENST00000573867 GRK5P34947 590 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 SLC25A1P53007 311 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 SHQ1Q6PI26 577 aaKnown RBP23.69■■□□□ 1.38
SCARF1-207ENST00000573867 ZNF786Q8N393 782 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 COQ7Q99807 217 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 PIMREGQ9BSJ6 248 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 BPESC1Q9GZL8 116 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 MED20Q9H944 212 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 C2CD3Q4AC94 2353 aa23.69■■□□□ 1.38
SCARF1-207ENST00000573867 IGHV4-61A0A0C4DH41 118 aa23.68■■□□□ 1.38
SCARF1-207ENST00000573867 DEAF1O75398 565 aaPredicted RBP23.68■■□□□ 1.38
SCARF1-207ENST00000573867 OSMP13725 252 aa23.68■■□□□ 1.38
SCARF1-207ENST00000573867 SPI1P17947 270 aa23.68■■□□□ 1.38
SCARF1-207ENST00000573867 POU1F1P28069 291 aa23.68■■□□□ 1.38
SCARF1-207ENST00000573867 MMP15P51511 669 aa23.68■■□□□ 1.38
SCARF1-207ENST00000573867 KRTAP27-1Q3LI81 207 aa23.68■■□□□ 1.38
SCARF1-207ENST00000573867 DUS3LQ96G46 650 aaKnown RBP23.68■■□□□ 1.38
SCARF1-207ENST00000573867 MAP6Q96JE9 813 aa23.68■■□□□ 1.38
SCARF1-207ENST00000573867 HDHD2Q9H0R4 259 aa23.68■■□□□ 1.38
SCARF1-207ENST00000573867 WDR76Q9H967 626 aa23.68■■□□□ 1.38
SCARF1-207ENST00000573867 FAM183AA6NL82 134 aa23.67■■□□□ 1.38
SCARF1-207ENST00000573867 ANXA8P13928 327 aa23.67■■□□□ 1.38
SCARF1-207ENST00000573867 COL8A2P25067 703 aa23.67■■□□□ 1.38
SCARF1-207ENST00000573867 GIFP27352 417 aa23.67■■□□□ 1.38
SCARF1-207ENST00000573867 GCH1P30793 250 aa23.67■■□□□ 1.38
SCARF1-207ENST00000573867 ARHGDIAP52565 204 aa23.67■■□□□ 1.38
SCARF1-207ENST00000573867 GINS1Q14691 196 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms