RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 NUAK2Q9H093 628 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 RNPEPL1Q9HAU8 725 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 SLC25A19Q9HC21 320 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 SRA1Q9HD15 236 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 RPRD1BQ9NQG5 326 aaKnown RBP12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 C8orf4Q9NR00 106 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 TVP23BQ9NYZ1 205 aa12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
NPLOC4-207ENST00000572346 ANK2Q01484 3957 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 CTLA4P16410 223 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 PAICSP22234 425 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 APEX1P27695 318 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 PEX2P28328 305 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 ZNF133P52736 654 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 SNTB2Q13425 540 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 CRMP1Q14194 572 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 SNAPC1Q16533 368 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 SGCAQ16586 387 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 MDP1Q86V88 176 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 RFLNBQ8N5W9 214 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 CYB561A3Q8NBI2 242 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 SLC37A3Q8NCC5 494 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 HPS1Q92902 700 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 NMD3Q96D46 503 aaKnown RBP12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 KCNN2Q9H2S1 579 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 VCXQ9H320 206 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 FN3KQ9H479 309 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 NOX3Q9HBY0 568 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 DYNLRB1Q9NP97 96 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 CMC2Q9NRP2 79 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 TMEM38BQ9NVV0 291 aa12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 NKX1-2Q9UD57 310 aaPredicted RBP12.73□□□□□ -0.37
NPLOC4-207ENST00000572346 IGKV1D-43A0A0B4J1Z2 117 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 OR6C68A6NDL8 312 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 MGRN1O60291 552 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 OR8G3PP0DMU2 310 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 RIN1Q13671 783 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 SLX4IPQ5VYV7 408 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 KRT80Q6KB66 452 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 CCDC36Q8IYA8 594 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 SLC22A24Q8N4F4 322 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 LINC01356Q8N9X3 169 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 NPEPL1Q8NDH3 523 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 IL17RDQ8NFM7 739 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 OR2T4Q8NH00 348 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 UBASH3BQ8TF42 649 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 C1orf159Q96HA4 380 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 TSSK2Q96PF2 358 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 GABARAPL3Q9BY60 117 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 B9D1Q9UPM9 204 aa12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 COA3Q9Y2R0 106 aaPredicted RBP12.72□□□□□ -0.37
NPLOC4-207ENST00000572346 ZAR1LA6NP61 321 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 PRR23D1E9PI22 279 aaPredicted RBP12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 LYNX1G3V0Z9 82 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 CASQ2O14958 399 aaPredicted RBP12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 SURF4O15260 269 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 TCF21O43680 179 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 HLA-DQA2P01906 255 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 ADRA2AP08913 450 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 PRR23D2P0DMB1 279 aaPredicted RBP12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 LYNX1P0DP58 116 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 NR4A1P22736 598 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 LAP3P28838 519 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 EPHA2P29317 976 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 CDAP32320 146 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 POLR2IP36954 125 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 CDH15P55291 814 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 MRPS34P82930 218 aaKnown RBP12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 RIPK1Q13546 671 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 MSMPQ1L6U9 139 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 SLC16A14Q7RTX9 510 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 LRRC18Q8N456 261 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 PACRGLQ8N7B6 248 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 ZNF555Q8NEP9 628 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 PROKR2Q8NFJ6 384 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 OR9Q1Q8NGQ5 310 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 TPK1Q9H3S4 243 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 TOR3AQ9H497 397 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 RNF121Q9H920 327 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 SIAEQ9HAT2 523 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 SMPD3Q9NY59 655 aaPredicted RBP12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 B3GNT2Q9NY97 397 aa12.71□□□□□ -0.37
NPLOC4-207ENST00000572346 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 SNAP29O95721 258 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 HLA-HP01893 362 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 CD79AP11912 226 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 MSR1P21757 451 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 PYCR1P32322 319 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 SRP14P37108 136 aaKnown RBP12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 CDC42P60953 191 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 GLO1Q04760 184 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 SLC36A2Q495M3 483 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 NRN1LQ496H8 165 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 ZNF362Q5T0B9 420 aaPredicted RBP12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 OGFRL1Q5TC84 451 aaPredicted RBP12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 PLBD1Q6P4A8 553 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 ZNF627Q7L945 461 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 GLB1L2Q8IW92 636 aa12.7□□□□□ -0.38
NPLOC4-207ENST00000572346 OR6V1Q8N148 313 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms