RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 CDCP1Q9H5V8 836 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 SERGEFQ9UGK8 458 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 B9D1Q9UPM9 204 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 LAP3P28838 519 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 SNTB1Q13884 538 aaKnown RBP13.93□□□□□ -0.18
CIITA-204ENST00000570546 SLC22A25Q6T423 547 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 CDH26Q8IXH8 852 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 LGI3Q8N145 548 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 HSD17B11Q8NBQ5 300 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 PLPP5Q8NEB5 264 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 NUDCD2Q8WVJ2 157 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 ST8SIA1Q92185 356 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 FGF14Q92915 247 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 RBMXL1Q96E39 390 aaKnown RBP13.93□□□□□ -0.18
CIITA-204ENST00000570546 GPR173Q9NS66 373 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 SLC23A1Q9UHI7 598 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 MBD1Q9UIS9 605 aaPredicted RBP13.93□□□□□ -0.18
CIITA-204ENST00000570546 TP53TG5Q9Y2B4 290 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 ATAD5Q96QE3 1844 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 ANKRD31Q8N7Z5 1873 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 ZNF831Q5JPB2 1677 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 OR2W5A6NFC9 320 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 SNRPNP63162 240 aaKnown RBP13.93□□□□□ -0.18
CIITA-204ENST00000570546 AANATQ16613 207 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 MAML2Q8IZL2 1156 aaPredicted RBP13.93□□□□□ -0.18
CIITA-204ENST00000570546 KCNRGQ8N5I3 272 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 TCEAL2Q9H3H9 227 aaPredicted RBP13.93□□□□□ -0.18
CIITA-204ENST00000570546 TIMM8BQ9Y5J9 83 aaPredicted RBP13.93□□□□□ -0.18
CIITA-204ENST00000570546 SHHQ15465 462 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 BPHLQ86WA6 291 aaPredicted RBP13.93□□□□□ -0.18
CIITA-204ENST00000570546 SLC30A7Q8NEW0 376 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 ADGRL4Q9HBW9 690 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 MED29Q9NX70 200 aa13.93□□□□□ -0.18
CIITA-204ENST00000570546 EXO1Q9UQ84 846 aaKnown RBP13.93□□□□□ -0.18
CIITA-204ENST00000570546 ADRB1P08588 477 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 TOR2AQ5JU69 321 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 OR9K2Q8NGE7 335 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 OR8D4Q8NGM9 314 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 OR6K3Q8NGY3 331 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 ST7LQ8TDW4 575 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 CCDC74AQ96AQ1 378 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 PBOV1Q9GZY1 135 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 CALHM2Q9HA72 323 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 OR6C65A6NJZ3 312 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 IDSB3KWA1 339 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 ZNF814B7Z6K7 855 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 NKX2-2O95096 273 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 IFNA10P01566 189 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 HBE1P02100 147 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 HOXB3P14651 431 aaPredicted RBP13.92□□□□□ -0.18
CIITA-204ENST00000570546 FKBP2P26885 142 aaKnown RBP13.92□□□□□ -0.18
CIITA-204ENST00000570546 PNLIPRP2P54317 469 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 ZNF266Q14584 549 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 EXT1Q16394 746 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 GLDNQ6ZMI3 551 aaPredicted RBP13.92□□□□□ -0.18
CIITA-204ENST00000570546 MAMSTRQ6ZN01 415 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 FOXJ3Q9UPW0 622 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 WNK3Q9BYP7 1800 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 TUBAL3A6NHL2 446 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 FFAR1O14842 300 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 CBX7O95931 251 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 GFERP55789 205 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 SSBP1Q04837 148 aaKnown RBP13.92□□□□□ -0.18
CIITA-204ENST00000570546 MZT1Q08AG7 82 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 RELL2Q8NC24 303 aaPredicted RBP13.92□□□□□ -0.18
CIITA-204ENST00000570546 SMCO4Q9NRQ5 59 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 A0A1W2PPV4 95 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 WNT1P04628 370 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 PSMB6P28072 239 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 HRH1P35367 487 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 GUCA2AQ02747 115 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 H3F3CQ6NXT2 135 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 KIAA0907Q7Z7F0 614 aaPredicted RBP13.92□□□□□ -0.18
CIITA-204ENST00000570546 DPPA2Q7Z7J5 298 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 SPACA5Q96QH8 159 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 GAREM1Q9H706 876 aa13.92□□□□□ -0.18
CIITA-204ENST00000570546 A0A1W2PNR3 127 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 NPIPB8E9PQR5 432 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 ABHD16AO95870 558 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 SERPINA7P05543 415 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 MRPS34P82930 218 aaKnown RBP13.91□□□□□ -0.18
CIITA-204ENST00000570546 LIPHQ8WWY8 451 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 KTI12Q96EK9 354 aaPredicted RBP13.91□□□□□ -0.18
CIITA-204ENST00000570546 GPR84Q9NQS5 396 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 SLC22A11Q9NSA0 550 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 A8MXE2 369 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 SOHLH1Q5JUK2 328 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 RNLSQ5VYX0 342 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 TMEM217Q8N7C4 229 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 CNEP1R1Q8N9A8 125 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 STT3BQ8TCJ2 826 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 UTP23Q9BRU9 249 aaKnown RBP13.91□□□□□ -0.18
CIITA-204ENST00000570546 DNAJB12Q9NXW2 375 aaKnown RBP13.91□□□□□ -0.18
CIITA-204ENST00000570546 V9GYH0 126 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 PYCARD-AS1I3L0S3 204 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 OIP5O43482 229 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 SCO1O75880 301 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 FOLR1P15328 257 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 MVB12AQ96EY5 273 aa13.91□□□□□ -0.18
CIITA-204ENST00000570546 PELI1Q96FA3 418 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms