RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 WACQ9BTA9 647 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 MROQ9BYG7 248 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 OR2H1Q9GZK4 316 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 ELOVL3Q9HB03 270 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 ACOXLQ9NUZ1 547 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 PLEK2Q9NYT0 353 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 TIMM10BQ9Y5J6 103 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 NBASA2RRP1 2371 aa13.48□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF878C9JN71 531 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 SGCEO43556 437 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 SULT1C4O75897 302 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ABHD16AO95870 558 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 TFAP2AP05549 437 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 MMP7P09237 267 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 TACSTD2P09758 323 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 JUNBP17275 347 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 OPRL1P41146 370 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 RIDAP52758 137 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 HIST1H3AP68431 136 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 BLMHQ13867 455 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 DOC2BQ14184 412 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 TIGD6Q17RP2 521 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 SLC25A35Q3KQZ1 300 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 CCDC92Q53HC0 331 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ELFN2Q5R3F8 820 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF684Q5T5D7 378 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 HIST2H3PS2Q5TEC6 136 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 STAC2Q6ZMT1 411 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 HIST2H3AQ71DI3 136 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 KLBQ86Z14 1044 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 CCDC36Q8IYA8 594 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF679Q8IYX0 411 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 C17orf78Q8N4C9 275 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 AKR7LQ8NHP1 331 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 WNT5BQ9H1J7 359 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 PNRC2Q9NPJ4 139 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 TRIM36Q9NQ86 728 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 SLC17A5Q9NRA2 495 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF224Q9NZL3 707 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 JKAMPQ9P055 326 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ERRFI1Q9UJM3 462 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 LRP12Q9Y561 859 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF503-AS2A6NEH8 195 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 RPP14O95059 124 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 PSMB1P20618 241 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ARR3P36575 388 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 RPL5P46777 297 aaKnown RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ASCL1P50553 236 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 GBX2P52951 348 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF774Q6NX45 483 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 VASH1Q7L8A9 365 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 KCTD20Q7Z5Y7 419 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF485Q8NCK3 441 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 PELI1Q96FA3 418 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ATF6BQ99941 703 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 HDHD2Q9H0R4 259 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 NOX3Q9HBY0 568 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 BABAM2Q9NXR7 383 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 ELOVL5Q9NYP7 299 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 SLC5A6Q9Y289 635 aa13.47□□□□□ -0.25
HERPUD1-219ENST00000570273 UBR5O95071 2799 aaPredicted RBP13.46□□□□□ -0.25
HERPUD1-219ENST00000570273 ARPC4-TTLL3A0A0A6YYG9 625 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 A0A1W2PR80 420 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 ZNF254O75437 659 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 LALBAP00709 142 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 HOXB1P14653 301 aaPredicted RBP13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 HSD11B1P28845 292 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 PSMB10P40306 273 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 HTR5AP47898 357 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 ALDH3B2P48448 385 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 GP2P55259 537 aaKnown RBP13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 TAS2R43P59537 309 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 GRB2P62993 217 aaKnown RBP13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 PSG4Q00888 419 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 GSG1Q2KHT4 349 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 ARMCX4Q5H9R4 360 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 PABPC1L2AQ5JQF8 200 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 LIPNQ5VXI9 398 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 DEGS2Q6QHC5 323 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 MDP1Q86V88 176 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 STEAP2Q8NFT2 490 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 COG8Q96MW5 612 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 OPALINQ96PE5 141 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 MGLLQ99685 303 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 DDX28Q9NUL7 540 aaKnown RBP13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 FBXL3Q9UKT7 428 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 GRIP1Q9Y3R0 1128 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 RELNP78509 3460 aa13.46□□□□□ -0.26
HERPUD1-219ENST00000570273 OR5H1A6NKK0 313 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 E9PI62 339 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 SYNGR3O43761 229 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 RAB1AP62820 205 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 FAM27E3Q08E93 113 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 MLLT11Q13015 90 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 MRPL28Q13084 256 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 RAB39AQ14964 217 aa13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 TSTQ16762 297 aaKnown RBP13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 ZNF829Q3KNS6 432 aaPredicted RBP13.45□□□□□ -0.26
HERPUD1-219ENST00000570273 SYT6Q5T7P8 510 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms