RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 MIXL1Q9H2W2 232 aa9.63□□□□□ -0.87
PDXDC1-216ENST00000569715 HMG20AQ9NP66 347 aa9.63□□□□□ -0.87
PDXDC1-216ENST00000569715 PAQR5Q9NXK6 330 aaPredicted RBP9.63□□□□□ -0.87
PDXDC1-216ENST00000569715 PEX16Q9Y5Y5 336 aa9.63□□□□□ -0.87
PDXDC1-216ENST00000569715 CHD8Q9HCK8 2581 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 TMEM269A0A1B0GVZ9 245 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 LOC110117498-PIK3R3F6TDL0 507 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 MRPL33O75394 65 aaKnown RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 ZNF254O75437 659 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 GATBO75879 557 aaKnown RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 ZNF84P51523 738 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 Q499Y3 187 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 HSD17B12Q53GQ0 312 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 Q6ZS92 163 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 CHMP1BQ7LBR1 199 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 TEX19Q8NA77 164 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 BCO1Q9HAY6 547 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 GPR35Q9HC97 309 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 SLC7A10Q9NS82 523 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 TMEM38BQ9NVV0 291 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 FAM206AQ9NX38 181 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 MAP1BP46821 2468 aaKnown RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 ZNF878C9JN71 531 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 SLC2A1P11166 492 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 S100A5P33763 92 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 CCR9P51686 369 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 FOXG1P55316 489 aaPredicted RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 LSM6P62312 80 aaKnown RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 MRPS34P82930 218 aaKnown RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 ZNF846Q147U1 533 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 CEP78Q5JTW2 689 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 DEGS2Q6QHC5 323 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 NUFIP2Q7Z417 695 aaKnown RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 BORCS5Q969J3 196 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 GFI1Q99684 422 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 SLCO5A1Q9H2Y9 848 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 OCEL1Q9H607 264 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 ABCB9Q9NP78 766 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 OR52A1Q9UKL2 312 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 GPR171O14626 319 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 PATE4P0C8F1 98 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 SLC2A2P11168 524 aaPredicted RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 TNFSF8P32971 234 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 GUCA1AP43080 201 aaPredicted RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 PRKXP51817 358 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 C9orf135Q5VTT2 229 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 S100ZQ8WXG8 99 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 EMC3Q9P0I2 261 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 CRNNQ9UBG3 495 aaPredicted RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 LHX6Q9UPM6 363 aa9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 AK6Q9Y3D8 172 aaKnown RBP9.62□□□□□ -0.87
PDXDC1-216ENST00000569715 SLC22A20A6NK97 555 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 ARL6IP5O75915 188 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 HNRNPCP07910 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 MADCAM1Q13477 382 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 IDNKQ5T6J7 187 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 SFXN4Q6P4A7 337 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 PAMR1Q6UXH9 720 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 CCDC190Q86UF4 302 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 OR5M9Q8NGP3 310 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 CPT1CQ8TCG5 803 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 SLC7A6Q92536 515 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 EXTL1Q92935 676 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 SLC30A2Q9BRI3 323 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 WDR12Q9GZL7 423 aaKnown RBP9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 PRDM14Q9GZV8 571 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 COMMD3Q9UBI1 195 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 SLC5A6Q9Y289 635 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 TRAV8-7A0A075B6U6 113 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 A0A0B4J203 849 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 TRAV1-2A0A0B4J238 106 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 THBS2P35442 1172 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 FGFBP3Q8TAT2 258 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 GPR148Q8TDV2 347 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 TSEN15Q8WW01 171 aaKnown RBP9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 TMEM106AQ96A25 262 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 ABHD17AQ96GS6 310 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 FOXB1Q99853 325 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 DAPK2Q9UIK4 370 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 CMAHPQ9Y471 501 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 N6AMT1Q9Y5N5 214 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 A0A1B0GVC2 190 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 LOC107986453A0A1B0GWG9 222 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 C5orf63A6NC05 138 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 ZNF724A8MTY0 619 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 K7ENP7 123 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 LMX1BO60663 402 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 YES1P07947 543 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 SRMP19623 302 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 RAB3BP20337 219 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 GTF3C1Q12789 2109 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 CCDC92Q53HC0 331 aaPredicted RBP9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 RIPPLY2Q5TAB7 128 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 FAM27BQ5VT28 67 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 ASPHD2Q6ICH7 369 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 INO80CQ6PI98 192 aaPredicted RBP9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 KLHL24Q6TFL4 600 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 PARP16Q8N5Y8 322 aa9.61□□□□□ -0.87
PDXDC1-216ENST00000569715 C12orf49Q9H741 205 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms