RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 VASH1Q7L8A9 365 aaPredicted RBP13.03□□□□□ -0.32
NME3-211ENST00000568561 HDXQ7Z353 690 aa13.03□□□□□ -0.32
NME3-211ENST00000568561 OAFQ86UD1 273 aa13.03□□□□□ -0.32
NME3-211ENST00000568561 FNDC8Q8TC99 324 aa13.03□□□□□ -0.32
NME3-211ENST00000568561 Q96M85 177 aa13.03□□□□□ -0.32
NME3-211ENST00000568561 GPA33Q99795 319 aa13.03□□□□□ -0.32
NME3-211ENST00000568561 MS4A7Q9GZW8 240 aaPredicted RBP13.03□□□□□ -0.32
NME3-211ENST00000568561 RERGLQ9H628 205 aa13.03□□□□□ -0.32
NME3-211ENST00000568561 VIPAS39Q9H9C1 493 aa13.03□□□□□ -0.32
NME3-211ENST00000568561 TBCCD1Q9NVR7 557 aa13.03□□□□□ -0.32
NME3-211ENST00000568561 ZNF446Q9NWS9 450 aa13.03□□□□□ -0.32
NME3-211ENST00000568561 FAM220BPB1ANY3 271 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 TMEM178BH3BS89 294 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 CDC42EP2O14613 210 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 IMPA2O14732 288 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 FFAR1O14842 300 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 RNASE1P07998 156 aaKnown RBP13.02□□□□□ -0.33
NME3-211ENST00000568561 DBHP09172 617 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 CTLA4P16410 223 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 ZNF26P17031 533 aaPredicted RBP13.02□□□□□ -0.33
NME3-211ENST00000568561 RPL4P36578 427 aaKnown RBP13.02□□□□□ -0.33
NME3-211ENST00000568561 MDH2P40926 338 aaKnown RBP13.02□□□□□ -0.33
NME3-211ENST00000568561 SLC9A3R2Q15599 337 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 LEG1Q6P5S2 330 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 TBPL2Q6SJ96 375 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 SYT9Q86SS6 491 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 OFCC1Q8IZS5 231 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 PARP8Q8N3A8 854 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 OR2T12Q8NG77 320 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 OR52E2Q8NGJ4 325 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 RASD2Q96D21 266 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 FNDC11Q9BVV2 318 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 GCM1Q9NP62 436 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 PTTG3PQ9NZH4 202 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 ASH2LQ9UBL3 628 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 IL19Q9UHD0 177 aa13.02□□□□□ -0.33
NME3-211ENST00000568561 TRAV40A0A0B4J280 105 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 ATP8B1O43520 1251 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 CYB5R3P00387 301 aaPredicted RBP13.01□□□□□ -0.33
NME3-211ENST00000568561 COX5BP10606 129 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 RPS2P15880 293 aaKnown RBP13.01□□□□□ -0.33
NME3-211ENST00000568561 OMGP23515 440 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 PRSS12P56730 875 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 PRKCDQ05655 676 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 KLF10Q13118 480 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 TRAM2Q15035 370 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 METTL21CQ5VZV1 264 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 OR2T2Q6IF00 324 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 TREML4Q6UXN2 200 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 ATG16L2Q8NAA4 619 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 SLC25A28Q96A46 364 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 HAVCR1Q96D42 359 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 ZNF570Q96NI8 536 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 ZMAT3Q9HA38 289 aaKnown RBP13.01□□□□□ -0.33
NME3-211ENST00000568561 GRHPRQ9UBQ7 328 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 WNK1Q9H4A3 2382 aa13.01□□□□□ -0.33
NME3-211ENST00000568561 A0A087WUU8 490 aa13□□□□□ -0.33
NME3-211ENST00000568561 TEX13CA0A0J9YWL9 993 aa13□□□□□ -0.33
NME3-211ENST00000568561 LOC100653049A0A140TA62 436 aa13□□□□□ -0.33
NME3-211ENST00000568561 H0YL77 283 aa13□□□□□ -0.33
NME3-211ENST00000568561 XKRYO14609 159 aa13□□□□□ -0.33
NME3-211ENST00000568561 SURF4O15260 269 aa13□□□□□ -0.33
NME3-211ENST00000568561 SASH3O75995 380 aa13□□□□□ -0.33
NME3-211ENST00000568561 KRT34O76011 436 aa13□□□□□ -0.33
NME3-211ENST00000568561 ZNF682O95780 498 aa13□□□□□ -0.33
NME3-211ENST00000568561 IFNW1P05000 195 aa13□□□□□ -0.33
NME3-211ENST00000568561 SELEP16581 610 aa13□□□□□ -0.33
NME3-211ENST00000568561 MDKP21741 143 aaPredicted RBP13□□□□□ -0.33
NME3-211ENST00000568561 SELENOWP63302 87 aa13□□□□□ -0.33
NME3-211ENST00000568561 DEFA6Q01524 100 aa13□□□□□ -0.33
NME3-211ENST00000568561 GUCY1A3Q02108 690 aa13□□□□□ -0.33
NME3-211ENST00000568561 PAX2Q02962 417 aa13□□□□□ -0.33
NME3-211ENST00000568561 PAX8Q06710 450 aa13□□□□□ -0.33
NME3-211ENST00000568561 AQP6Q13520 282 aa13□□□□□ -0.33
NME3-211ENST00000568561 KRR1Q13601 381 aaKnown RBP13□□□□□ -0.33
NME3-211ENST00000568561 COQ5Q5HYK3 327 aa13□□□□□ -0.33
NME3-211ENST00000568561 FAM201AQ5SY85 155 aa13□□□□□ -0.33
NME3-211ENST00000568561 ZNF730Q6ZMV8 503 aa13□□□□□ -0.33
NME3-211ENST00000568561 ZSCAN2Q7Z7L9 614 aaPredicted RBP13□□□□□ -0.33
NME3-211ENST00000568561 MUC20Q8N307 709 aaPredicted RBP13□□□□□ -0.33
NME3-211ENST00000568561 BHLHE23Q8NDY6 225 aa13□□□□□ -0.33
NME3-211ENST00000568561 MEGF10Q96KG7 1140 aa13□□□□□ -0.33
NME3-211ENST00000568561 SIKE1Q9BRV8 207 aa13□□□□□ -0.33
NME3-211ENST00000568561 SSBP3Q9BWW4 388 aaPredicted RBP13□□□□□ -0.33
NME3-211ENST00000568561 LRCH1Q9Y2L9 728 aa13□□□□□ -0.33
NME3-211ENST00000568561 ELOVL7A1L3X0 281 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 PRSS37A4D1T9 235 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 OR6C6A6NF89 314 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 BBIP1A8MTZ0 92 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 HMGB1P1B2RPK0 211 aaPredicted RBP12.99□□□□□ -0.33
NME3-211ENST00000568561 RER1O15258 196 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 SLC16A7O60669 478 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 CD14P08571 375 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 WNT2P09544 360 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 IFNA8P32881 189 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 DBPQ10586 325 aaPredicted RBP12.99□□□□□ -0.33
NME3-211ENST00000568561 CCDC92Q53HC0 331 aaPredicted RBP12.99□□□□□ -0.33
NME3-211ENST00000568561 BRD3OSQ6XYD6 125 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 SPATC1Q76KD6 591 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 FAM122BQ7Z309 247 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms