RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ASCL1P50553 236 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 MRPS34P82930 218 aaKnown RBP6.76□□□□□ -1.33
SMG1-214ENST00000568038 TGFBR3Q03167 851 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 HSF2Q03933 536 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 GLO1Q04760 184 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 P2RY6Q15077 328 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 SLC35D3Q5M8T2 416 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 LINC01590Q5TEZ4 76 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 LCN1P1Q5VSP4 162 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 MEDAGQ5VYS4 303 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 KRT80Q6KB66 452 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 ANKRD16Q6P6B7 361 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 XKRXQ6PP77 449 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 UGT2A3Q6UWM9 527 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 STAC2Q6ZMT1 411 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 BHLHA15Q7RTS1 189 aaPredicted RBP6.76□□□□□ -1.33
SMG1-214ENST00000568038 ERI1Q8IV48 349 aaKnown RBP6.76□□□□□ -1.33
SMG1-214ENST00000568038 GID4Q8IVV7 300 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 GLB1L2Q8IW92 636 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 LRRC18Q8N456 261 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 ZNF808Q8N4W9 903 aaPredicted RBP6.76□□□□□ -1.33
SMG1-214ENST00000568038 OR1K1Q8NGR3 316 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 C11orf40Q8WZ69 217 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 BCL2L2Q92843 193 aaPredicted RBP6.76□□□□□ -1.33
SMG1-214ENST00000568038 Q96MT0 163 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 SH3GL3Q99963 347 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 RACGAP1Q9H0H5 632 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 WDR76Q9H967 626 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 EMC7Q9NPA0 242 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 KCNJ16Q9NPI9 418 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 POLE4Q9NR33 117 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 TMEM38BQ9NVV0 291 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 ELOVL5Q9NYP7 299 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 MOKQ9UQ07 419 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 POLR1DQ9Y2S0 133 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 LRRC42Q9Y546 428 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 PCDHGB5Q9Y5G0 923 aa6.76□□□□□ -1.33
SMG1-214ENST00000568038 NCOA6Q14686 2063 aaPredicted RBP6.76□□□□□ -1.33
SMG1-214ENST00000568038 KMT2BQ9UMN6 2715 aaPredicted RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 SNTNA6NMZ2 147 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 C16orf97H3BN30 126 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 ZNF593O00488 134 aaPredicted RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 XPNPEP2O43895 674 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SELENOFO60613 162 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 FARS2O95363 451 aaKnown RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 CLDN14O95500 239 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 PATE4P0C8F1 98 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 RNF224P0DH78 156 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 OR8G3PP0DMU2 310 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 GAAP10253 952 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 ZNF823P16415 610 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 NPR2P20594 1047 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 PSMB1P20618 241 aaKnown RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 AGAP20933 346 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 HTR1FP30939 366 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 ATP6V1E1P36543 226 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 RPS27P42677 84 aaKnown RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 CAPZA2P47755 286 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SH3BGRP55822 239 aaPredicted RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 UBE2NP61088 152 aaKnown RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 TUBA1BP68363 451 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 TUBA4AP68366 448 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 ADAM8P78325 824 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SRSF1Q07955 248 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMG1-214ENST00000568038 MED21Q13503 144 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SNTB1Q13884 538 aaKnown RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 STK11Q15831 433 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 GABRA6Q16445 453 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 TBRG1Q3YBR2 411 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 HIKESHIQ53FT3 197 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 FAM209AQ5JX71 171 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SLC25A30Q5SVS4 291 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 C6orf141Q5SZD1 244 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 LAIR2Q6ISS4 152 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 FOXL2NBQ6ZUU3 175 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 TUBA1AQ71U36 451 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SHFQ7M4L6 423 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 LINC00346Q8IVM7 164 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SKA3Q8IX90 412 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SLC22A24Q8N4F4 322 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 BPIFB6Q8NFQ5 453 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SLC26A10Q8NG04 563 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 OR10H5Q8NGA6 315 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 OR51G2Q8NGK0 314 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 OR6N2Q8NGY6 317 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 OR52N5Q8NH56 324 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SMAP2Q8WU79 429 aaPredicted RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 RNASE6Q93091 150 aaKnown RBP6.75□□□□□ -1.33
SMG1-214ENST00000568038 RFKQ969G6 155 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 NABP1Q96AH0 204 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 RNFT2Q96EX2 444 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 LRRC46Q96FV0 321 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 INTS14Q96SY0 518 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 ZNF416Q9BWM5 594 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 HDHD5Q9BXW7 423 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 KCNN2Q9H2S1 579 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 NELFAQ9H3P2 528 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 RNF121Q9H920 327 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 SIAEQ9HAT2 523 aa6.75□□□□□ -1.33
SMG1-214ENST00000568038 MRPL22Q9NWU5 206 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms