RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 RAB19A4D1S5 217 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 PINLYPA6NC86 204 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF233A6NK53 670 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF98A6NK75 572 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 E7ESA3 106 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ATP6V1G2-DDX39BF2Z307 99 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 M0QZK8 103 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 TXNDC9O14530 226 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CXCL11O14625 94 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 PRRG1O14668 218 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ACOX3O15254 700 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CLOCKO15516 846 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CHP2O43745 196 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CALUO43852 315 aaPredicted RBP2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 GMDSO60547 372 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 JAK2O60674 1132 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 AKR7A3O95154 331 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 FAM107AO95990 144 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 HPNP05981 417 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 RBP1P09455 135 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 OR4E1P0C645 316 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CALCBP10092 127 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 PSMC3P17980 439 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 NCF2P19878 526 aaPredicted RBP2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 PTNP21246 168 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 NT5EP21589 574 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 MSR1P21757 451 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CD40LGP29965 261 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 HOXA9P31269 272 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CRATP43155 626 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 SYKP43405 635 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF133P52736 654 aaPredicted RBP2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 OSTNP61366 133 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 GNGT1P63211 74 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 SPIBQ01892 262 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 C2orf54Q08AI8 447 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 IL24Q13007 206 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 SCGB2A2Q13296 93 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 SLC5A12Q1EHB4 618 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 LIN52Q52LA3 116 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ARMC12Q5T9G4 340 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ATF7IP2Q5U623 682 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ACSM5Q6NUN0 579 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CENPUQ71F23 418 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 FAM220AQ7Z4H9 259 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 VTCN1Q7Z7D3 282 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 MICU2Q8IYU8 434 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ZCCHC7Q8N3Z6 543 aaKnown RBP2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 EIF1ADQ8N9N8 165 aaKnown RBP2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 SNX31Q8N9S9 440 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 OR52M1Q8NGK5 317 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 AKR7LQ8NHP1 331 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 DNAJC9Q8WXX5 260 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ING5Q8WYH8 240 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ESR2Q92731 530 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 FBXO32Q969P5 355 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 FAM104AQ969W3 186 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 NTAN1Q96AB6 310 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 SDSLQ96GA7 329 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 PDXPQ96GD0 296 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF799Q96GE5 643 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 C9orf72Q96LT7 481 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 PPP3R2Q96LZ3 170 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 RILPQ96NA2 401 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 BIRC8Q96P09 236 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 SERPINB12Q96P63 405 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CSPG4P5Q96PW8 444 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 SMIM14Q96QK8 99 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 TUBGCP2Q9BSJ2 902 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 EDEM2Q9BV94 578 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 MND1Q9BWT6 205 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF717Q9BY31 904 aaPredicted RBP2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 METTL9Q9H1A3 318 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 OR52A5Q9H2C5 316 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 PPA2Q9H2U2 334 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 RHBGQ9H310 441 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 Q9H521 79 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CD274Q9NZQ7 290 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CCDC59Q9P031 241 aaKnown RBP2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 GNPTGQ9UJJ9 305 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 ADAM28Q9UKQ2 775 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 PRELID3BQ9Y3B1 194 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 HEY1Q9Y5J3 304 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 MAST2Q6P0Q8 1798 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 PKD1L2Q7Z442 2459 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 GVINP1Q7Z2Y8 2422 aa2.5□□□□□ -2.01
HERPUD1-212ENST00000567944 CHD7Q9P2D1 2997 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 DDX60LQ5H9U9 1706 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SMIM28A0A1B0GU29 152 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 A0A1B0GVG6 124 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 PQLC2LA1A4F0 135 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 USP27XA6NNY8 438 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 IQCF5A8MTL0 148 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 PDZK1P1A8MUH7 402 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 GPR171O14626 319 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 TOR1AO14656 332 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ITGB1BP1O14713 200 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 RTL8CO15255 209 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 MED7O43513 233 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 PFKFB2O60825 505 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms