RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 FOXJ3Q9UPW0 622 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 LOXHD1Q8IVV2 1947 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 HMSDA8MTL9 139 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZNF727A8MUV8 499 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 YKT6O15498 198 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 HYAL3O43820 417 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 RPA2P15927 270 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 SSTP61278 116 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 B4GALNT1Q00973 533 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 IKZF1Q13422 519 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 ELFN2Q5R3F8 820 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 Q6ZSR6 202 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 PELI1Q96FA3 418 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 STACQ99469 402 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZNF2Q9BSG1 426 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 LDAHQ9H6V9 325 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 MARCH5Q9NX47 278 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 XRCC2O43543 280 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 CLDN1O95832 211 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 GALP22466 123 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 TSFMP43897 325 aaKnown RBP11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 POLR2HP52434 150 aaKnown RBP11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 ELLP55199 621 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 RNLSQ5VYX0 342 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 MMP26Q9NRE1 261 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 MIOXQ9UGB7 285 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 PADI1Q9ULC6 663 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 MAST2Q6P0Q8 1798 aa11.3□□□□□ -0.6
CSPG4P13-202ENST00000567704 TMEM218A2RU14 115 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 DUX1O43812 170 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 NFYBP25208 207 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 PSMB3P49720 205 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 DHRS2Q13268 280 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 IRF3Q14653 427 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 TMEM65Q6PI78 240 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 RSPO2Q6UXX9 243 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZNF595Q8IYB9 648 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR2L13Q8N349 312 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR6K3Q8NGY3 331 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZNF251Q9BRH9 671 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 JAM3Q9BX67 310 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 OSGIN2Q9Y236 505 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 HCRTR1O43613 425 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 LANCL1O43813 399 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 HMGA1P17096 107 aaKnown RBP11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 CEBPBP17676 345 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 MFAP5Q13361 173 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 GUK1Q16774 197 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZNF100Q8IYN0 542 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 MS4A4AQ96JQ5 239 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 BTF3L4Q96K17 158 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 MTFP1Q9UDX5 166 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 KCNG2Q9UJ96 466 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 MRPS17Q9Y2R5 130 aaKnown RBP11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 TRBV5-3A0A0A0MS03 114 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR6C68A6NDL8 312 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 TGOLN2O43493 480 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 PDGFBP01127 241 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 ECI1P42126 302 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 H3F3AP84243 136 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 KCNAB1Q14722 419 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 ETFBKMTQ8IXQ9 262 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 ULBP2Q9BZM5 246 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 NXF2Q9GZY0 626 aaKnown RBP11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 DAPP1Q9UN19 280 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 TAF1LQ8IZX4 1826 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 IGF2P01344 180 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 DUSP1P28562 367 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 METRNLQ641Q3 311 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZNF610Q8N9Z0 462 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 STT3BQ8TCJ2 826 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 ANKRD9Q96BM1 317 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 GPR137Q96N19 417 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 USB1Q9BQ65 265 aaKnown RBP11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 ABHD6Q9BV23 337 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 PLEKHA2Q9HB19 425 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 NECAP2Q9NVZ3 263 aa11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 ZNF346Q9UL40 294 aaKnown RBP11.29□□□□□ -0.6
CSPG4P13-202ENST00000567704 CFIP05156 583 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 MSR1P21757 451 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 BCKDHBP21953 392 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 AADACP22760 399 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 RPL27P61353 136 aaKnown RBP11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 BAXQ07812 192 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 MSMO1Q15800 293 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 TMEM229BQ8NBD8 167 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 BORCS7Q96B45 105 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 SIGLEC11Q96RL6 698 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 ARV1Q9H2C2 271 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 OR5V1Q9UGF6 321 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 COL24A1Q17RW2 1714 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 E5RGE8 158 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 SEMA4FO95754 770 aa11.28□□□□□ -0.6
CSPG4P13-202ENST00000567704 KCNJ3P48549 501 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms