RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CDK5R2Q13319 367 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 ENDOGQ14249 297 aaKnown RBP15.77■□□□□ 0.12
LINC01238-205ENST00000567549 TMEM155Q4W5P6 130 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 CBLL1Q75N03 491 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 MUC20Q8N307 709 aaPredicted RBP15.77■□□□□ 0.12
LINC01238-205ENST00000567549 LRRC75AQ8NAA5 344 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 OR13C2Q8NGS9 318 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 POP5Q969H6 163 aaKnown RBP15.77■□□□□ 0.12
LINC01238-205ENST00000567549 FAM162AQ96A26 154 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 GPA33Q99795 319 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 TMPRSS13Q9BYE2 586 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 ZMAT3Q9HA38 289 aaKnown RBP15.77■□□□□ 0.12
LINC01238-205ENST00000567549 IL19Q9UHD0 177 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 KLHL21Q9UJP4 597 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 POLR1DQ9Y2S0 133 aa15.77■□□□□ 0.12
LINC01238-205ENST00000567549 A0A087WUU8 490 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 H0YHG0 523 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 KHDRBS3O75525 346 aaKnown RBP15.76■□□□□ 0.11
LINC01238-205ENST00000567549 KITLGP21583 273 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 CFPP27918 469 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 SDHAP31040 664 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 YAP1P46937 504 aaKnown RBP15.76■□□□□ 0.11
LINC01238-205ENST00000567549 DNAL1Q4LDG9 190 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 ARMCX4Q5H9R4 360 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 VTCN1Q7Z7D3 282 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 GLB1L2Q8IW92 636 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 ARHGAP24Q8N264 748 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 SGMS2Q8NHU3 365 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 PTP4A1Q93096 173 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 HSH2DQ96JZ2 352 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 MRI1Q9BV20 369 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 MMADHCQ9H3L0 296 aaPredicted RBP15.76■□□□□ 0.11
LINC01238-205ENST00000567549 MSL2Q9HCI7 577 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 DDX28Q9NUL7 540 aaKnown RBP15.76■□□□□ 0.11
LINC01238-205ENST00000567549 TMEM106BQ9NUM4 274 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 RHCGQ9UBD6 479 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 PURGQ9UJV8 347 aaKnown RBP15.76■□□□□ 0.11
LINC01238-205ENST00000567549 AURKCQ9UQB9 309 aa15.76■□□□□ 0.11
LINC01238-205ENST00000567549 TMEM89A2RUT3 159 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 OR6C6A6NF89 314 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 NGFP01138 241 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 RAC2P15153 192 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 ADRA2CP18825 462 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 CRABP1P29762 137 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 RPS6KA3P51812 740 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 LCN2P80188 198 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 MXRA7P84157 204 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 PSG7Q13046 419 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 KRR1Q13601 381 aaKnown RBP15.75■□□□□ 0.11
LINC01238-205ENST00000567549 ESCO2Q56NI9 601 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 HACD2Q6Y1H2 254 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 SLC15A3Q8IY34 581 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 OR2Z1Q8NG97 314 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 GTF3AQ92664 365 aaKnown RBP15.75■□□□□ 0.11
LINC01238-205ENST00000567549 RASD2Q96D21 266 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 KCTD14Q9BQ13 255 aaPredicted RBP15.75■□□□□ 0.11
LINC01238-205ENST00000567549 NMNAT1Q9HAN9 279 aaPredicted RBP15.75■□□□□ 0.11
LINC01238-205ENST00000567549 TAS2R1Q9NYW7 299 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 PPP1R3CQ9UQK1 317 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 CACNG2Q9Y698 323 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 ENPP4Q9Y6X5 453 aa15.75■□□□□ 0.11
LINC01238-205ENST00000567549 A0A1W2PRQ8 180 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 SERPINA1P01009 418 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 H1F0P07305 194 aaKnown RBP15.74■□□□□ 0.11
LINC01238-205ENST00000567549 SBK2P0C263 348 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 GPR4P46093 362 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 SMIM11AP58511 58 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 BTG1P62324 171 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 DGCR6Q14129 220 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 VASH1Q7L8A9 365 aaPredicted RBP15.74■□□□□ 0.11
LINC01238-205ENST00000567549 ZNF283Q8N7M2 679 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 CLDN22Q8N7P3 220 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 HAVCR1Q96D42 359 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 CMTM6Q9NX76 183 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 NDE1Q9NXR1 346 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 OR5V1Q9UGF6 321 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 SAMD4AQ9UPU9 718 aaKnown RBP15.74■□□□□ 0.11
LINC01238-205ENST00000567549 ADAM18Q9Y3Q7 739 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 NBEAL1Q6ZS30 2694 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 DYSFO75923 2080 aa15.74■□□□□ 0.11
LINC01238-205ENST00000567549 H7C1C5 153 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 J3KTA2 159 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 GSC2O15499 205 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 SLC16A7O60669 478 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 PRSS23O95084 383 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 IGHV2-70P01814 119 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 SELEP16581 610 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 RHCEP18577 417 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 MDH2P40926 338 aaKnown RBP15.73■□□□□ 0.11
LINC01238-205ENST00000567549 SRP9P49458 86 aaKnown RBP15.73■□□□□ 0.11
LINC01238-205ENST00000567549 SLC7A2P52569 658 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 LCN6P62502 163 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 MESTQ5EB52 335 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 FGD3Q5JSP0 725 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 DPY19L2P2Q6ZN68 376 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 C1orf87Q8N0U7 546 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 POU5F2Q8N7G0 328 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 GJC3Q8NFK1 279 aa15.73■□□□□ 0.11
LINC01238-205ENST00000567549 APOBEC3DQ96AK3 386 aaPredicted RBP15.73■□□□□ 0.11
LINC01238-205ENST00000567549 CMBLQ96DG6 245 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms