RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 TBPL2Q6SJ96 375 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 RBMS3Q6XE24 437 aaKnown RBP12.64□□□□□ -0.39
RNF40-209ENST00000566703 Q6ZR03 302 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 GLB1L2Q8IW92 636 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 DEFB108BQ8NET1 73 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 OR2Z1Q8NG97 314 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 OR5L1Q8NGL2 311 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 ZNF570Q96NI8 536 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 ESM1Q9NQ30 184 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 NRIP3Q9NQ35 241 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 PLEK2Q9NYT0 353 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 EGFL7Q9UHF1 273 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 NUP50Q9UKX7 468 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 PPP1R3CQ9UQK1 317 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 ADAM18Q9Y3Q7 739 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 ENPP4Q9Y6X5 453 aa12.64□□□□□ -0.39
RNF40-209ENST00000566703 A0A1W2PRQ8 180 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 H7C1C5 153 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 SASH3O75995 380 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 NDUFB2O95178 105 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 CTLA4P16410 223 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 ZNF12P17014 697 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 ZNF26P17031 533 aaPredicted RBP12.63□□□□□ -0.39
RNF40-209ENST00000566703 SDHAP31040 664 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 GPR4P46093 362 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 RGS6P49758 472 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 BTG1P62324 171 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 LCN6P62502 163 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 FOXL1Q12952 345 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 ZNF154Q13106 437 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 DGCR6Q14129 220 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 KCNMB1Q16558 191 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 DOK3Q7L591 496 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 OR1F12Q8NHA8 337 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 SLC7A13Q8TCU3 470 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 ITLN1Q8WWA0 313 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 RASD2Q96D21 266 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 SIGLEC11Q96RL6 698 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 GPX7Q96SL4 187 aaPredicted RBP12.63□□□□□ -0.39
RNF40-209ENST00000566703 POFUT1Q9H488 388 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 CCDC134Q9H6E4 229 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 EFCAB1Q9HAE3 211 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 MMP26Q9NRE1 261 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 DCAF16Q9NXF7 216 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 VSX1Q9NZR4 365 aaPredicted RBP12.63□□□□□ -0.39
RNF40-209ENST00000566703 SIGLEC7Q9Y286 467 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 INSIG2Q9Y5U4 225 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 AUP1Q9Y679 476 aa12.63□□□□□ -0.39
RNF40-209ENST00000566703 OR6C6A6NF89 314 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 F5H0A9 414 aaPredicted RBP12.62□□□□□ -0.39
RNF40-209ENST00000566703 TRAPPC2LH3BP13 241 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 SLC16A7O60669 478 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 CCDC22O60826 627 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 FSTL3O95633 263 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 SERPINA1P01009 418 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 WNT2P09544 360 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 HKR1P10072 659 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 MDH2P40926 338 aaKnown RBP12.62□□□□□ -0.39
RNF40-209ENST00000566703 GUCY1A3Q02108 690 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 SF3A3Q12874 501 aaKnown RBP eCLIP12.62□□□□□ -0.39
RNF40-209ENST00000566703 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 C8orf82Q6P1X6 216 aaPredicted RBP12.62□□□□□ -0.39
RNF40-209ENST00000566703 PGM2L1Q6PCE3 622 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 FBXW12Q6X9E4 464 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 HACD2Q6Y1H2 254 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 DPY19L2P2Q6ZN68 376 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 ADCK1Q86TW2 530 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 MUC20Q8N307 709 aaPredicted RBP12.62□□□□□ -0.39
RNF40-209ENST00000566703 POU5F2Q8N7G0 328 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 OR13G1Q8NGZ3 307 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 HSH2DQ96JZ2 352 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 MRI1Q9BV20 369 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 SYT4Q9H2B2 425 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 ZMAT3Q9HA38 289 aaKnown RBP12.62□□□□□ -0.39
RNF40-209ENST00000566703 RPS6KA6Q9UK32 745 aa12.62□□□□□ -0.39
RNF40-209ENST00000566703 COA3Q9Y2R0 106 aaPredicted RBP12.62□□□□□ -0.39
RNF40-209ENST00000566703 FAM32AQ9Y421 112 aaKnown RBP12.62□□□□□ -0.39
RNF40-209ENST00000566703 TMEM178BH3BS89 294 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 NME4O00746 187 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 TXNDC12O95881 172 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 H1F0P07305 194 aaKnown RBP12.61□□□□□ -0.39
RNF40-209ENST00000566703 PPIAL4GP0DN37 164 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 COX4I1P13073 169 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 RHCEP18577 417 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 PRTN3P24158 256 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 OMPP47874 163 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 GSK3BP49841 420 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 SLC7A2P52569 658 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 PAX8Q06710 450 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 KRR1Q13601 381 aaKnown RBP12.61□□□□□ -0.39
RNF40-209ENST00000566703 ZMYND11Q15326 602 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 CCDC92Q53HC0 331 aaPredicted RBP12.61□□□□□ -0.39
RNF40-209ENST00000566703 ESCO2Q56NI9 601 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 ARMCX4Q5H9R4 360 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 ZNF771Q7L3S4 317 aaPredicted RBP12.61□□□□□ -0.39
RNF40-209ENST00000566703 TSEN54Q7Z6J9 526 aaKnown RBP12.61□□□□□ -0.39
RNF40-209ENST00000566703 ATG16L2Q8NAA4 619 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 OR8G5Q8NG78 346 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 OR2V2Q96R30 315 aa12.61□□□□□ -0.39
RNF40-209ENST00000566703 ZNF747Q9BV97 191 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms