RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 SLC7A2P52569 658 aa23.39■■□□□ 1.33
UBFD1-206ENST00000566669 GUCY1A3Q02108 690 aa23.39■■□□□ 1.33
UBFD1-206ENST00000566669 MESTQ5EB52 335 aa23.39■■□□□ 1.33
UBFD1-206ENST00000566669 POU5F2Q8N7G0 328 aa23.39■■□□□ 1.33
UBFD1-206ENST00000566669 C3orf56Q8N813 242 aa23.39■■□□□ 1.33
UBFD1-206ENST00000566669 FAM162AQ96A26 154 aa23.39■■□□□ 1.33
UBFD1-206ENST00000566669 EMC7Q9NPA0 242 aa23.39■■□□□ 1.33
UBFD1-206ENST00000566669 H7C1C5 153 aa23.38■■□□□ 1.33
UBFD1-206ENST00000566669 H1F0P07305 194 aaKnown RBP23.38■■□□□ 1.33
UBFD1-206ENST00000566669 LCN6P62502 163 aa23.38■■□□□ 1.33
UBFD1-206ENST00000566669 LCN2P80188 198 aa23.38■■□□□ 1.33
UBFD1-206ENST00000566669 KRR1Q13601 381 aaKnown RBP23.38■■□□□ 1.33
UBFD1-206ENST00000566669 MUC20Q8N307 709 aaPredicted RBP23.38■■□□□ 1.33
UBFD1-206ENST00000566669 OR2Z1Q8NG97 314 aa23.38■■□□□ 1.33
UBFD1-206ENST00000566669 SLC7A13Q8TCU3 470 aa23.38■■□□□ 1.33
UBFD1-206ENST00000566669 KCTD14Q9BQ13 255 aaPredicted RBP23.38■■□□□ 1.33
UBFD1-206ENST00000566669 NRIP3Q9NQ35 241 aa23.38■■□□□ 1.33
UBFD1-206ENST00000566669 VSX1Q9NZR4 365 aaPredicted RBP23.38■■□□□ 1.33
UBFD1-206ENST00000566669 PPP1R3CQ9UQK1 317 aa23.38■■□□□ 1.33
UBFD1-206ENST00000566669 WNK2Q9Y3S1 2297 aa23.38■■□□□ 1.33
UBFD1-206ENST00000566669 NME4O00746 187 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 FSHBP01225 129 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 SBK2P0C263 348 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 RHCEP18577 417 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 GSK3BP49841 420 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 C8orf82Q6P1X6 216 aaPredicted RBP23.37■■□□□ 1.33
UBFD1-206ENST00000566669 DNM1P34Q6PK57 102 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 TBPL2Q6SJ96 375 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 RBMS3Q6XE24 437 aaKnown RBP23.37■■□□□ 1.33
UBFD1-206ENST00000566669 LRRC28Q86X40 367 aaPredicted RBP23.37■■□□□ 1.33
UBFD1-206ENST00000566669 SGMS2Q8NHU3 365 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 RASD2Q96D21 266 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 CMBLQ96DG6 245 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 PATZ1Q9HBE1 687 aaKnown RBP23.37■■□□□ 1.33
UBFD1-206ENST00000566669 SIGLEC7Q9Y286 467 aa23.37■■□□□ 1.33
UBFD1-206ENST00000566669 OR6C6A6NF89 314 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 SLC16A7O60669 478 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 PTP4A3O75365 173 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 GMNNO75496 209 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 SCG5P05408 212 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 CTLA4P16410 223 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 RPS6KA3P51812 740 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 BTG1P62324 171 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 SF3A3Q12874 501 aaKnown RBP eCLIP23.36■■□□□ 1.33
UBFD1-206ENST00000566669 KCNMB1Q16558 191 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 HSP90B2PQ58FF3 399 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 DPY19L2P2Q6ZN68 376 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 OR1F12Q8NHA8 337 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 GPA33Q99795 319 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 SYT4Q9H2B2 425 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 ZMAT3Q9HA38 289 aaKnown RBP23.36■■□□□ 1.33
UBFD1-206ENST00000566669 ASH2LQ9UBL3 628 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 OPN4Q9UHM6 478 aa23.36■■□□□ 1.33
UBFD1-206ENST00000566669 SAMD4AQ9UPU9 718 aaKnown RBP23.36■■□□□ 1.33
UBFD1-206ENST00000566669 TANC2Q9HCD6 1990 aa23.35■■□□□ 1.33
UBFD1-206ENST00000566669 FUT4P22083 530 aa23.35■■□□□ 1.33
UBFD1-206ENST00000566669 CRABP1P29762 137 aa23.35■■□□□ 1.33
UBFD1-206ENST00000566669 MDH2P40926 338 aaKnown RBP23.35■■□□□ 1.33
UBFD1-206ENST00000566669 GJC3Q8NFK1 279 aa23.35■■□□□ 1.33
UBFD1-206ENST00000566669 CMTM5Q96DZ9 223 aa23.35■■□□□ 1.33
UBFD1-206ENST00000566669 SLC6A7Q99884 636 aa23.35■■□□□ 1.33
UBFD1-206ENST00000566669 DDX28Q9NUL7 540 aaKnown RBP23.35■■□□□ 1.33
UBFD1-206ENST00000566669 AURKCQ9UQB9 309 aa23.35■■□□□ 1.33
UBFD1-206ENST00000566669 STARD10Q9Y365 291 aa23.35■■□□□ 1.33
UBFD1-206ENST00000566669 A8MXK9 166 aa23.34■■□□□ 1.33
UBFD1-206ENST00000566669 TXNDC12O95881 172 aa23.34■■□□□ 1.33
UBFD1-206ENST00000566669 SMIM11AP58511 58 aa23.34■■□□□ 1.33
UBFD1-206ENST00000566669 KRT72Q14CN4 511 aa23.34■■□□□ 1.33
UBFD1-206ENST00000566669 FBXW12Q6X9E4 464 aa23.34■■□□□ 1.33
UBFD1-206ENST00000566669 APOBEC3DQ96AK3 386 aaPredicted RBP23.34■■□□□ 1.33
UBFD1-206ENST00000566669 FAM46AQ96IP4 442 aaKnown RBP23.34■■□□□ 1.33
UBFD1-206ENST00000566669 MRI1Q9BV20 369 aa23.34■■□□□ 1.33
UBFD1-206ENST00000566669 HDHD2Q9H0R4 259 aa23.34■■□□□ 1.33
UBFD1-206ENST00000566669 ABCD2Q9UBJ2 740 aa23.34■■□□□ 1.33
UBFD1-206ENST00000566669 POLR1DQ9Y2S0 133 aa23.34■■□□□ 1.33
UBFD1-206ENST00000566669 RGS9O75916 674 aaPredicted RBP23.33■■□□□ 1.33
UBFD1-206ENST00000566669 FSTL3O95633 263 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 ZNF26P17031 533 aaPredicted RBP23.33■■□□□ 1.33
UBFD1-206ENST00000566669 SLC6A9P48067 706 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 NUDT2P50583 147 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 ESCO2Q56NI9 601 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 ARMCX4Q5H9R4 360 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 FGD3Q5JSP0 725 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 OR13G1Q8NGZ3 307 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 RSRC1Q96IZ7 334 aaKnown RBP23.33■■□□□ 1.33
UBFD1-206ENST00000566669 PLA2G12AQ9BZM1 189 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 EGFL7Q9UHF1 273 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 LRCH1Q9Y2L9 728 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 COA3Q9Y2R0 106 aaPredicted RBP23.33■■□□□ 1.33
UBFD1-206ENST00000566669 AUP1Q9Y679 476 aa23.33■■□□□ 1.33
UBFD1-206ENST00000566669 Q6ZR03 302 aa23.32■■□□□ 1.32
UBFD1-206ENST00000566669 ZNF582Q96NG8 517 aaPredicted RBP23.32■■□□□ 1.32
UBFD1-206ENST00000566669 OR2V2Q96R30 315 aa23.32■■□□□ 1.32
UBFD1-206ENST00000566669 COQ7Q99807 217 aa23.32■■□□□ 1.32
UBFD1-206ENST00000566669 SPAG4Q9NPE6 437 aa23.32■■□□□ 1.32
UBFD1-206ENST00000566669 NDUFAF4Q9P032 175 aa23.32■■□□□ 1.32
UBFD1-206ENST00000566669 IL20RAQ9UHF4 553 aa23.32■■□□□ 1.32
UBFD1-206ENST00000566669 NUP50Q9UKX7 468 aa23.32■■□□□ 1.32
UBFD1-206ENST00000566669 IMPA2O14732 288 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 SELEP16581 610 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms