RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 NMNAT3Q96T66 252 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 SAP30LQ9HAJ7 183 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 KRCC1Q9NPI7 259 aaPredicted RBP12.44□□□□□ -0.42
FANCA-220ENST00000566409 DECR2Q9NUI1 292 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 TMEFF2Q9UIK5 374 aaPredicted RBP12.44□□□□□ -0.42
FANCA-220ENST00000566409 B9D1Q9UPM9 204 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 LHFPL6Q9Y693 200 aa12.44□□□□□ -0.42
FANCA-220ENST00000566409 TCRBV5S2A0A599 114 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 B4DSR2 109 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 H3BSA7 217 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 UBOX5O94941 541 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 ABHD16AO95870 558 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 MT-ND5P03915 603 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 T-ENOLP0DO92 83 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 HIST1H1CP16403 213 aaKnown RBP12.43□□□□□ -0.42
FANCA-220ENST00000566409 THBS2P35442 1172 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 ERFP50548 548 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 ARHGDIAP52565 204 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 DVL1P1P54792 670 aaPredicted RBP12.43□□□□□ -0.42
FANCA-220ENST00000566409 MXRA7P84157 204 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 MS4A2Q01362 244 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 MVKQ03426 396 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 RSPO1Q2MKA7 263 aaPredicted RBP12.43□□□□□ -0.42
FANCA-220ENST00000566409 FAM209AQ5JX71 171 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 LEG1Q6P5S2 330 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 UNQ6126/PRO20091Q6UXV3 157 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 Q6ZR03 302 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 OR4K13Q8NH42 304 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 OR1F12Q8NHA8 337 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 BTBD10Q9BSF8 475 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 LPAR2Q9HBW0 351 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 SRA1Q9HD15 236 aaKnown RBP12.43□□□□□ -0.42
FANCA-220ENST00000566409 NDE1Q9NXR1 346 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 PLEK2Q9NYT0 353 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 ACTR3BQ9P1U1 418 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 GRIP1Q9Y3R0 1128 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 LYVE1Q9Y5Y7 322 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 ANK2Q01484 3957 aa12.43□□□□□ -0.42
FANCA-220ENST00000566409 TENM1Q9UKZ4 2725 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 PLSCR5A0PG75 271 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 OR6C68A6NDL8 312 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 TPD52L2O43399 206 aaKnown RBP12.42□□□□□ -0.42
FANCA-220ENST00000566409 DEAF1O75398 565 aaPredicted RBP12.42□□□□□ -0.42
FANCA-220ENST00000566409 TFP02787 698 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 KITLGP21583 273 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 SLC6A6P31641 620 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 MAGEA2P43356 314 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 TSPAN31Q12999 210 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 CDK5R2Q13319 367 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 ZNF770Q6IQ21 691 aaPredicted RBP12.42□□□□□ -0.42
FANCA-220ENST00000566409 CORO6Q6QEF8 472 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 ARL9Q6T311 187 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 ZNF620Q6ZNG0 422 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 RINLQ6ZS11 566 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.42□□□□□ -0.42
FANCA-220ENST00000566409 OR9Q2Q8NGE9 314 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 OR4C15Q8NGM1 316 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 CMBLQ96DG6 245 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 NSL1Q96IY1 281 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 DDOQ99489 341 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 IFT27Q9BW83 186 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 EGLN3Q9H6Z9 239 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 CYSLTR2Q9NS75 346 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 DCAF16Q9NXF7 216 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 PURGQ9UJV8 347 aaKnown RBP12.42□□□□□ -0.42
FANCA-220ENST00000566409 TMCC3Q9ULS5 477 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 WIPI2Q9Y4P8 454 aa12.42□□□□□ -0.42
FANCA-220ENST00000566409 MSMBP08118 114 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 CD55P08174 381 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 HNF1AP20823 631 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 CRABP1P29762 137 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 LIPAP38571 399 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 CENPAP49450 140 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 MNAT1P51948 309 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 TEKQ02763 1124 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 COX10Q12887 443 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 PPP1R8Q12972 351 aaKnown RBP12.41□□□□□ -0.42
FANCA-220ENST00000566409 HFEQ30201 348 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 KRTAP24-1Q3LI83 254 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 MTX3Q5HYI7 312 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 ZNF362Q5T0B9 420 aaPredicted RBP12.41□□□□□ -0.42
FANCA-220ENST00000566409 ZBTB46Q86UZ6 589 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 NPEPL1Q8NDH3 523 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 SLC26A10Q8NG04 563 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 GNPDA2Q8TDQ7 276 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 ZNRF4Q8WWF5 429 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 CCL17Q92583 94 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 TMEM186Q96B77 213 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 ELMOD3Q96FG2 381 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 PLA2G12AQ9BZM1 189 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 FN3KQ9H479 309 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 ZNF665Q9H7R5 613 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 RPRD1BQ9NQG5 326 aaKnown RBP12.41□□□□□ -0.42
FANCA-220ENST00000566409 HIF1ANQ9NWT6 349 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 VNN3Q9NY84 501 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 ZDHHC8Q9ULC8 765 aa12.41□□□□□ -0.42
FANCA-220ENST00000566409 TIMM8AO60220 97 aaPredicted RBP12.4□□□□□ -0.42
FANCA-220ENST00000566409 KRT36O76013 467 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 FAM107AO95990 144 aa12.4□□□□□ -0.42
FANCA-220ENST00000566409 GASTP01350 101 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms