RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 UCN3Q969E3 161 aa9.4□□□□□ -0.9
UBFD1-205ENST00000566136 ABTB1Q969K4 478 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-205ENST00000566136 TP53INP1Q96A56 240 aa9.4□□□□□ -0.9
UBFD1-205ENST00000566136 ZNF75AQ96N20 296 aa9.4□□□□□ -0.9
UBFD1-205ENST00000566136 EPYCQ99645 322 aa9.4□□□□□ -0.9
UBFD1-205ENST00000566136 OR51V1Q9H2C8 321 aa9.4□□□□□ -0.9
UBFD1-205ENST00000566136 RAB23Q9ULC3 237 aa9.4□□□□□ -0.9
UBFD1-205ENST00000566136 PPIAL4AQ9Y536 164 aa9.4□□□□□ -0.9
UBFD1-205ENST00000566136 SNX11Q9Y5W9 270 aa9.4□□□□□ -0.9
UBFD1-205ENST00000566136 HEATR5BQ9P2D3 2071 aa9.4□□□□□ -0.9
UBFD1-205ENST00000566136 PRAMEF33A0A0G2JMD5 474 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.4□□□□□ -0.91
UBFD1-205ENST00000566136 M0R129 80 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 PRAMEF10O60809 474 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 F13BP05160 661 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 MMP11P24347 488 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 PSMB9P28065 219 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 DUSP1P28562 367 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 CD1CP29017 333 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 AP3S2P59780 193 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 SLC35A2P78381 396 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 FOXE3Q13461 319 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 GANABQ14697 944 aaKnown RBP9.4□□□□□ -0.91
UBFD1-205ENST00000566136 PDGFRLQ15198 375 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 TNFAIP8L2Q6P589 184 aaPredicted RBP9.4□□□□□ -0.91
UBFD1-205ENST00000566136 AHSA2Q719I0 299 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 ENTHD1Q8IYW4 607 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 BEST3Q8N1M1 668 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 LINC01561Q8N1V8 128 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 OR10G2Q8NGC3 310 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 OR9Q2Q8NGE9 314 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 SETD7Q8WTS6 366 aaKnown RBP9.4□□□□□ -0.91
UBFD1-205ENST00000566136 APH1BQ8WW43 257 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 RORBQ92753 470 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 TNFRSF13CQ96RJ3 184 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 TTYH2Q9BSA4 534 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 ULBP2Q9BZM5 246 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 LPAR2Q9HBW0 351 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 ANKHQ9HCJ1 492 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 AMBNQ9NP70 447 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 NECAP2Q9NVZ3 263 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 SCN3BQ9NY72 215 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 PILRAQ9UKJ1 303 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 TPRKBQ9Y3C4 175 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 ETV7Q9Y603 341 aa9.4□□□□□ -0.91
UBFD1-205ENST00000566136 A0A0A6YYH2 397 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 HYKKA2RU49 373 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 A6NJ64 397 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 LRRC30A6NM36 301 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 A8MUA0 341 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 TDGF1P13385 188 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 BCKDHBP21953 392 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 RBM34P42696 430 aaKnown RBP9.39□□□□□ -0.91
UBFD1-205ENST00000566136 MAT1AQ00266 395 aaKnown RBP9.39□□□□□ -0.91
UBFD1-205ENST00000566136 DMRTC1Q5HYR2 192 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 TRIM40Q6P9F5 258 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 KMT5CQ86Y97 462 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 ZNF100Q8IYN0 542 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 LGI4Q8N135 537 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 OR11H4Q8NGC9 324 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 OR4D5Q8NGN0 318 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 OR5K2Q8NHB8 316 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 IL17DQ8TAD2 202 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 UBE2E3Q969T4 207 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 NIPSNAP1Q9BPW8 284 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 ZNF717Q9BY31 904 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-205ENST00000566136 TOLLIPQ9H0E2 274 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 DUSP21Q9H596 190 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 GPN2Q9H9Y4 310 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-205ENST00000566136 ABCB10Q9NRK6 738 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 THAP10Q9P2Z0 257 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-205ENST00000566136 RNF6Q9Y252 685 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 DNAH14Q0VDD8 3507 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 H3BN98 237 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 PAK4O96013 591 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-205ENST00000566136 SLC35G4P0C7Q5 338 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 HSD11B1P28845 292 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 PTGER1P34995 402 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 RPL3P39023 403 aaKnown RBP9.39□□□□□ -0.91
UBFD1-205ENST00000566136 RUNX3Q13761 415 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 CTF1Q16619 201 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 EXOSC8Q96B26 276 aaKnown RBP9.39□□□□□ -0.91
UBFD1-205ENST00000566136 ZNF300Q96RE9 604 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-205ENST00000566136 MACROD1Q9BQ69 325 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 AIF1LQ9BQI0 150 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 MS4A8Q9BY19 250 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 SLC38A1Q9H2H9 487 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 TAS2R7Q9NYW3 318 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 POMT2Q9UKY4 750 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 POLDIP2Q9Y2S7 368 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 TIMM10BQ9Y5J6 103 aa9.39□□□□□ -0.91
UBFD1-205ENST00000566136 TRAV18A0A075B6X5 111 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 ARGFXA6NJG6 315 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 WISP2O76076 250 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 LCKP06239 509 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 CXCL12P48061 93 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 IDH2P48735 452 aaKnown RBP9.38□□□□□ -0.91
UBFD1-205ENST00000566136 IRF4Q15306 451 aa9.38□□□□□ -0.91
UBFD1-205ENST00000566136 LPAL2Q16609 132 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms