RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 GALEQ14376 348 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 RAB39AQ14964 217 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 TBC1D28Q2M2D7 210 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 C3orf36Q3SXR2 165 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 KCTD21Q4G0X4 260 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 CCDC92Q53HC0 331 aaPredicted RBP6.79□□□□□ -1.32
CDH1-208ENST00000565810 ZNF774Q6NX45 483 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 DEGS2Q6QHC5 323 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 PLEKHG7Q6ZR37 379 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 SPATC1Q76KD6 591 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 PRSS48Q7RTY5 328 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 FAM220AQ7Z4H9 259 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 LHFPL3Q86UP9 236 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 WFDC8Q8IUA0 241 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 EGFL6Q8IUX8 553 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 ZNF679Q8IYX0 411 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 KLHL36Q8N4N3 616 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 OR1F12Q8NHA8 337 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 FGFBP3Q8TAT2 258 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 LINC01560Q8TB33 94 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 SMAP2Q8WU79 429 aaPredicted RBP6.79□□□□□ -1.32
CDH1-208ENST00000565810 SLAMF6Q96DU3 332 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 ZC3HAV1LQ96H79 300 aaKnown RBP6.79□□□□□ -1.32
CDH1-208ENST00000565810 MAP6Q96JE9 813 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 DACH2Q96NX9 599 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 WFIKKN1Q96NZ8 548 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 COQ7Q99807 217 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 ATF6BQ99941 703 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 KCNS3Q9BQ31 491 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 ALG8Q9BVK2 526 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 JAM3Q9BX67 310 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 C1QTNF6Q9BXI9 259 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 NIPAL2Q9H841 368 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 FKBP14Q9NWM8 211 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 B3GNT2Q9NY97 397 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 ZNF224Q9NZL3 707 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 COPS3Q9UNS2 423 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 MYO7BQ6PIF6 2116 aa6.79□□□□□ -1.32
CDH1-208ENST00000565810 ZNF462Q96JM2 2506 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 METTL15A6NJ78 407 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 PRSS44E7EML9 344 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 F5H5K5 113 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 J3QLW9 94 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 M0R1B8 84 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 SYNGR3O43761 229 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 SULT1C4O75897 302 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 IGKV3-15P01624 115 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 MT-ND5P03915 603 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ZNF19P17023 458 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 STOMP27105 288 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 CCKARP32238 428 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ZNF83P51522 516 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 TPTEP56180 551 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 HIST1H3AP68431 136 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 GALK2Q01415 458 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ROM1Q03395 351 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ZNF85Q03923 595 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 MRPL28Q13084 256 aaKnown RBP6.78□□□□□ -1.32
CDH1-208ENST00000565810 HIST2H3PS2Q5TEC6 136 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 RNLSQ5VYX0 342 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ZNF544Q6NX49 715 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ARL9Q6T311 187 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 TMEM108Q6UXF1 575 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 LRRN1Q6UXK5 716 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 UNQ6126/PRO20091Q6UXV3 157 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 CFAP77Q6ZQR2 320 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 HIST2H3AQ71DI3 136 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 VASH1Q7L8A9 365 aaPredicted RBP6.78□□□□□ -1.32
CDH1-208ENST00000565810 MED12LQ86YW9 2145 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 SVOPQ8N4V2 548 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 YIPF7Q8N8F6 280 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 SLC30A7Q8NEW0 376 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 HAVCR2Q8TDQ0 301 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ST7LQ8TDW4 575 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 RNF133Q8WVZ7 376 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 DOCK7Q96N67 2140 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 OR8B4Q96RC9 309 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 DCLRE1CQ96SD1 692 aaKnown RBP6.78□□□□□ -1.32
CDH1-208ENST00000565810 KCNJ15Q99712 375 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 RHNO1Q9BSD3 238 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 MND1Q9BWT6 205 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 WNT5BQ9H1J7 359 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ESRP2Q9H6T0 727 aaKnown RBP6.78□□□□□ -1.32
CDH1-208ENST00000565810 SP140LQ9H930 580 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ELOVL3Q9HB03 270 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 CDH20Q9HBT6 801 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 VCX3AQ9NNX9 186 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ERVK13-1Q9NX77 482 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 ERVK-18Q9QC07 812 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 CRNNQ9UBG3 495 aaPredicted RBP6.78□□□□□ -1.32
CDH1-208ENST00000565810 EIF3KQ9UBQ5 218 aaKnown RBP6.78□□□□□ -1.32
CDH1-208ENST00000565810 ATPIF1Q9UII2 106 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 GNG8Q9UK08 70 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 CAB39Q9Y376 341 aaPredicted RBP6.78□□□□□ -1.32
CDH1-208ENST00000565810 SPEF1Q9Y4P9 236 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 CFAP46Q8IYW2 2715 aa6.78□□□□□ -1.32
CDH1-208ENST00000565810 PHF3Q92576 2039 aaKnown RBP6.77□□□□□ -1.32
CDH1-208ENST00000565810 A0A087WXM4 84 aa6.77□□□□□ -1.33
CDH1-208ENST00000565810 TMEM129A0AVI4 362 aa6.77□□□□□ -1.33
CDH1-208ENST00000565810 C5orf49A4QMS7 147 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms