RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 LIMS1P48059 325 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 ERFP50548 548 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 KRR1Q13601 381 aaKnown RBP20.13■□□□□ 0.81
NME3-206ENST00000564252 RRM2BQ7LG56 351 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 TREML1Q86YW5 311 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 BPIFB2Q8N4F0 458 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 ZDHHC22Q8N966 263 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 HAVCR1Q96D42 359 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 NDEL1Q9GZM8 345 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 SYT4Q9H2B2 425 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 PLEK2Q9NYT0 353 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 EGFL7Q9UHF1 273 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 SIGLEC7Q9Y286 467 aa20.13■□□□□ 0.81
NME3-206ENST00000564252 OR6C6A6NF89 314 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 IMPA2O14732 288 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 NDUFB2O95178 105 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 TNFRSF1AP19438 455 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 SDHAP31040 664 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 LSM6P62312 80 aaKnown RBP20.12■□□□□ 0.81
NME3-206ENST00000564252 TMEM155Q4W5P6 130 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 CYP4Z1Q86W10 505 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 SPICQ8N5J4 248 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 DEFB108BQ8NET1 73 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 ITLN1Q8WWA0 313 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 DVL3Q92997 716 aaPredicted RBP20.12■□□□□ 0.81
NME3-206ENST00000564252 SIGLEC11Q96RL6 698 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 GPX7Q96SL4 187 aaPredicted RBP20.12■□□□□ 0.81
NME3-206ENST00000564252 PATZ1Q9HBE1 687 aaKnown RBP20.12■□□□□ 0.81
NME3-206ENST00000564252 NRIP3Q9NQ35 241 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 MMP26Q9NRE1 261 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 VSX1Q9NZR4 365 aaPredicted RBP20.12■□□□□ 0.81
NME3-206ENST00000564252 ASH2LQ9UBL3 628 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 IL19Q9UHD0 177 aa20.12■□□□□ 0.81
NME3-206ENST00000564252 COA3Q9Y2R0 106 aaPredicted RBP20.12■□□□□ 0.81
NME3-206ENST00000564252 POLR3KQ9Y2Y1 108 aaPredicted RBP20.12■□□□□ 0.81
NME3-206ENST00000564252 A0A1W2PRQ8 180 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 SLC16A7O60669 478 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 NCK1P16333 377 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 DGCR6Q14129 220 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 CCDC92Q53HC0 331 aaPredicted RBP20.11■□□□□ 0.81
NME3-206ENST00000564252 GPR139Q6DWJ6 353 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 C1orf94Q6P1W5 598 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 LRRC28Q86X40 367 aaPredicted RBP20.11■□□□□ 0.81
NME3-206ENST00000564252 GLB1L2Q8IW92 636 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 C3orf56Q8N813 242 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 C22orf15Q8WYQ4 148 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 FAM162AQ96A26 154 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 COG8Q96MW5 612 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 EFCAB1Q9HAE3 211 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 IL20RAQ9UHF4 553 aa20.11■□□□□ 0.81
NME3-206ENST00000564252 TRAPPC2LH3BP13 241 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 KHDRBS3O75525 346 aaKnown RBP20.1■□□□□ 0.81
NME3-206ENST00000564252 H1F0P07305 194 aaKnown RBP20.1■□□□□ 0.81
NME3-206ENST00000564252 FPR2P25090 351 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 OMPP47874 163 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 FXYD6P3P58550 94 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 SEC61A1P61619 476 aaKnown RBP20.1■□□□□ 0.81
NME3-206ENST00000564252 BTG1P62324 171 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 ZMYND11Q15326 602 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 TUSC1Q2TAM9 212 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 HACD2Q6Y1H2 254 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 PTCHD4Q6ZW05 846 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 KLHL36Q8N4N3 616 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 OR1F12Q8NHA8 337 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 PTP4A1Q93096 173 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 OR2V2Q96R30 315 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 KCTD14Q9BQ13 255 aaPredicted RBP20.1■□□□□ 0.81
NME3-206ENST00000564252 RERGLQ9H628 205 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 ZNF446Q9NWS9 450 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 ATPIF1Q9UII2 106 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 PPP1R3CQ9UQK1 317 aa20.1■□□□□ 0.81
NME3-206ENST00000564252 F5H0A9 414 aaPredicted RBP20.09■□□□□ 0.81
NME3-206ENST00000564252 J3QW42 95 aa20.09■□□□□ 0.81
NME3-206ENST00000564252 SURF4O15260 269 aa20.09■□□□□ 0.81
NME3-206ENST00000564252 DBHP09172 617 aa20.09■□□□□ 0.81
NME3-206ENST00000564252 RAC2P15153 192 aa20.09■□□□□ 0.81
NME3-206ENST00000564252 SLC6A9P48067 706 aa20.09■□□□□ 0.81
NME3-206ENST00000564252 UBA52P62987 128 aaKnown RBP20.09■□□□□ 0.81
NME3-206ENST00000564252 FGD3Q5JSP0 725 aa20.09■□□□□ 0.81
NME3-206ENST00000564252 ADCK1Q86TW2 530 aa20.09■□□□□ 0.81
NME3-206ENST00000564252 POP5Q969H6 163 aaKnown RBP20.09■□□□□ 0.81
NME3-206ENST00000564252 ZMYND19Q96E35 227 aaPredicted RBP20.09■□□□□ 0.81
NME3-206ENST00000564252 RSRC1Q96IZ7 334 aaKnown RBP20.09■□□□□ 0.81
NME3-206ENST00000564252 NUAK2Q9H093 628 aa20.09■□□□□ 0.81
NME3-206ENST00000564252 NDUFAF4Q9P032 175 aa20.09■□□□□ 0.81
NME3-206ENST00000564252 ABCD2Q9UBJ2 740 aa20.09■□□□□ 0.81
NME3-206ENST00000564252 A8MXK9 166 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 SOCS2O14508 198 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 RER1O15258 196 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 CCDC22O60826 627 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 ZNF12P17014 697 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 NUDT2P50583 147 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 ZNF154Q13106 437 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 HLXQ14774 488 aaPredicted RBP20.08■□□□□ 0.81
NME3-206ENST00000564252 SEC23BQ15437 767 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 KCNMB1Q16558 191 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 C7orf34Q96L11 122 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 NTN4Q9HB63 628 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 RPS6KA6Q9UK32 745 aa20.08■□□□□ 0.81
NME3-206ENST00000564252 IER3IP1Q9Y5U9 82 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms