RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ASB10Q8WXI3 467 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 ST8SIA1Q92185 356 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 AQP3Q92482 292 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 FAHD2AQ96GK7 314 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 NUDT16L1Q9BRJ7 211 aaKnown RBP11.72□□□□□ -0.53
USB1-207ENST00000563149 TINAGL1Q9GZM7 467 aaPredicted RBP11.72□□□□□ -0.53
USB1-207ENST00000563149 CHRDQ9H2X0 955 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 COMMD9Q9P000 198 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 CGGBP1Q9UFW8 167 aaPredicted RBP11.72□□□□□ -0.53
USB1-207ENST00000563149 EMC9Q9Y3B6 208 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 A0A1W2PR77 199 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 DCDC2BA2VCK2 349 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 M0QYG6 137 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 SOX1O00570 391 aaPredicted RBP11.72□□□□□ -0.53
USB1-207ENST00000563149 CD27P26842 260 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 ARL4DP49703 201 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 MMP16P51512 607 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 SUMO3P55854 103 aaPredicted RBP11.72□□□□□ -0.53
USB1-207ENST00000563149 GPR85P60893 370 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 MELKQ14680 651 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 ZNF260Q3ZCT1 412 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 C14orf28Q4W4Y0 310 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 C11orf87Q6NUJ2 197 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 PAPD4Q6PIY7 484 aaKnown RBP11.72□□□□□ -0.53
USB1-207ENST00000563149 LRFN4Q6PJG9 635 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 TFAP2EQ6VUC0 442 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 SYT13Q7L8C5 426 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 SLC25A42Q86VD7 318 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 JAGN1Q8N5M9 183 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 PLPP5Q8NEB5 264 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 OR13C8Q8NGS7 320 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 ST7LQ8TDW4 575 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 ST8SIA2Q92186 375 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 ST8SIA4Q92187 359 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 FAM46BQ96A09 425 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 ZBTB8AQ96BR9 441 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 PHYHIPLQ96FC7 376 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 LDAHQ9H6V9 325 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 RASL12Q9NYN1 266 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 GDF2Q9UK05 429 aaPredicted RBP11.72□□□□□ -0.53
USB1-207ENST00000563149 RHBDD3Q9Y3P4 386 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 SLCO1B1Q9Y6L6 691 aa11.72□□□□□ -0.53
USB1-207ENST00000563149 TDRD6O60522 2096 aaKnown RBP11.71□□□□□ -0.53
USB1-207ENST00000563149 TMEM269A0A1B0GVZ9 245 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 KANTRA0A1W2PQU2 76 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 CPED1A4D0V7 1026 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 ANKUB1A6NFN9 424 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 OR5H14A6NHG9 310 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 RHPN2P1A8MT19 583 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 NPIPA5E9PKD4 350 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 MS4A18H0YCH9 400 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 CDK2AP1O14519 115 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 ALOX12BO75342 701 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 WDPCPO95876 746 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 BDKRB2P30411 391 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 APOBEC1P41238 236 aaKnown RBP11.71□□□□□ -0.54
USB1-207ENST00000563149 SPOCK1Q08629 439 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 DHRS2Q13268 280 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 NR0B2Q15466 257 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 MS4A18Q3C1V0 323 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 DCXRQ7Z4W1 244 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 MDGA2Q7Z553 956 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 LYG2Q86SG7 212 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.71□□□□□ -0.54
USB1-207ENST00000563149 DTWD2Q8NBA8 298 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 OR51A2Q8NGJ7 313 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 KCNK17Q96T54 332 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 UQCC2Q9BRT2 126 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 COQ3Q9NZJ6 369 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 DHCR7Q9UBM7 475 aaKnown RBP11.71□□□□□ -0.54
USB1-207ENST00000563149 PISDQ9UG56 409 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 KLK13Q9UKR3 277 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 NPIPA1Q9UND3 350 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 TNFSF18Q9UNG2 199 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 PLEKHA6Q9Y2H5 1048 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 F5P12259 2224 aa11.71□□□□□ -0.54
USB1-207ENST00000563149 IGHV1OR15-9A0A0B4J2B8 117 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 OR14I1A6ND48 311 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 LMO7DNF2Z398 122 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 EIF1AYO14602 144 aaKnown RBP11.7□□□□□ -0.54
USB1-207ENST00000563149 SPDEFO95238 335 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 BPNT1O95861 308 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 IL2RAP01589 272 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 H2BFMP0C1H6 154 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 TBPP20226 339 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 ZBTB25P24278 435 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 EIF1AXP47813 144 aaKnown RBP11.7□□□□□ -0.54
USB1-207ENST00000563149 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.54
USB1-207ENST00000563149 RNASE10Q5GAN6 216 aaKnown RBP11.7□□□□□ -0.54
USB1-207ENST00000563149 OTPQ5XKR4 325 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 H1FNTQ75WM6 255 aaPredicted RBP11.7□□□□□ -0.54
USB1-207ENST00000563149 STPG2Q8N412 459 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 D2HGDHQ8N465 521 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 OR1J2Q8NGS2 313 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 RNF133Q8WVZ7 376 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 DNAJA3Q96EY1 480 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 SLC6A7Q99884 636 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 C1QTNF6Q9BXI9 259 aa11.7□□□□□ -0.54
USB1-207ENST00000563149 FANCFQ9NPI8 374 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms