RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 LYNX1P0DP58 116 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 CLUP10909 449 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 ANXA8P13928 327 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 HOXB6P17509 224 aaKnown RBP8.7□□□□□ -1.02
HERC1-212ENST00000561348 WNT5AP41221 380 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 RPS7P62081 194 aaKnown RBP8.7□□□□□ -1.02
HERC1-212ENST00000561348 PPP1CBP62140 327 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 LSM6P62312 80 aaKnown RBP8.7□□□□□ -1.02
HERC1-212ENST00000561348 COX10Q12887 443 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 GGTLC2Q14390 218 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 TAF13Q15543 124 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 EFNB3Q15768 340 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 TSTQ16762 297 aaKnown RBP8.7□□□□□ -1.02
HERC1-212ENST00000561348 ZNF718Q3SXZ3 478 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 SLC27A4Q6P1M0 643 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 FOXL2NBQ6ZUU3 175 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 RFPL4BQ6ZWI9 263 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 VASH1Q7L8A9 365 aaPredicted RBP8.7□□□□□ -1.02
HERC1-212ENST00000561348 ZNF511Q8NB15 262 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 GJC3Q8NFK1 279 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 OR1F12Q8NHA8 337 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 POM121L2Q96KW2 1035 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 C4orf45Q96LM5 186 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 DOK1Q99704 481 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 TEX12Q9BXU0 123 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 REG4Q9BYZ8 158 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 GRIP2Q9C0E4 1043 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 OR2J1Q9GZK6 312 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 ELOVL3Q9HB03 270 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 PAPOLBQ9NRJ5 636 aaKnown RBP8.7□□□□□ -1.02
HERC1-212ENST00000561348 CENPMQ9NSP4 180 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 GPR160Q9UJ42 338 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 NDRG4Q9ULP0 352 aaKnown RBP8.7□□□□□ -1.02
HERC1-212ENST00000561348 BAIAP2Q9UQB8 552 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 ARFGEF3Q5TH69 2177 aa8.7□□□□□ -1.02
HERC1-212ENST00000561348 PLSCR5A0PG75 271 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 SPRY3O43610 288 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 TIMM8AO60220 97 aaPredicted RBP8.69□□□□□ -1.02
HERC1-212ENST00000561348 CDC14BO60729 498 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 SNAP29O95721 258 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 TFP02787 698 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 MT-ND5P03915 603 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 TP53P04637 393 aaPredicted RBP8.69□□□□□ -1.02
HERC1-212ENST00000561348 OSMP13725 252 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 DAOP14920 347 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 PAX1P15863 534 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 PAICSP22234 425 aaKnown RBP8.69□□□□□ -1.02
HERC1-212ENST00000561348 FMO3P31513 532 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 MPV17P39210 176 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 SLC6A9P48067 706 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 PDLIM4P50479 330 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 KPNB1Q14974 876 aaKnown RBP8.69□□□□□ -1.02
HERC1-212ENST00000561348 CCDC92Q53HC0 331 aaPredicted RBP8.69□□□□□ -1.02
HERC1-212ENST00000561348 ELFN2Q5R3F8 820 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 ACSM5Q6NUN0 579 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 PLBD1Q6P4A8 553 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 SHQ1Q6PI26 577 aaKnown RBP8.69□□□□□ -1.02
HERC1-212ENST00000561348 SYT9Q86SS6 491 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 ZDHHC13Q8IUH4 622 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 LNX2Q8N448 690 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 PAPD5Q8NDF8 572 aaKnown RBP8.69□□□□□ -1.02
HERC1-212ENST00000561348 SLC26A10Q8NG04 563 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 OR5K1Q8NHB7 308 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 ZNRF4Q8WWF5 429 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 GTF3AQ92664 365 aaKnown RBP8.69□□□□□ -1.02
HERC1-212ENST00000561348 RACGAP1Q9H0H5 632 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 MS4A5Q9H3V2 200 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 WDR76Q9H967 626 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 NTN4Q9HB63 628 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 KRT84Q9NSB2 600 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 TVP23BQ9NYZ1 205 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 PTTG3PQ9NZH4 202 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 LHFPL6Q9Y693 200 aa8.69□□□□□ -1.02
HERC1-212ENST00000561348 PRR23D1E9PI22 279 aaPredicted RBP8.68□□□□□ -1.02
HERC1-212ENST00000561348 ZNF593O00488 134 aaPredicted RBP8.68□□□□□ -1.02
HERC1-212ENST00000561348 MITFO75030 526 aaPredicted RBP8.68□□□□□ -1.02
HERC1-212ENST00000561348 LY6G6DO95868 133 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 PRR23D2P0DMB1 279 aaPredicted RBP8.68□□□□□ -1.02
HERC1-212ENST00000561348 GAAP10253 952 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 FCGR1AP12314 374 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 SPI1P17947 270 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 PCSK6P29122 969 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 GRK5P34947 590 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 PPOXP50336 477 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 DAPP51397 102 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 CCL8P80075 99 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 GK3PQ14409 553 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 ATP6AP1Q15904 470 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 SNAPC1Q16533 368 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 CFAP77Q6ZQR2 320 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 ASRGL1Q7L266 308 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 ZBTB46Q86UZ6 589 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 HIPK1Q86Z02 1210 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 ERI1Q8IV48 349 aaKnown RBP8.68□□□□□ -1.02
HERC1-212ENST00000561348 OR5AS1Q8N127 324 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 OR6N2Q8NGY6 317 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 UBASH3BQ8TF42 649 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 IPCEF1Q8WWN9 437 aaPredicted RBP8.68□□□□□ -1.02
HERC1-212ENST00000561348 UTP4Q969X6 686 aaKnown RBP8.68□□□□□ -1.02
HERC1-212ENST00000561348 ZMYND19Q96E35 227 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms