RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 LMO4P61968 165 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 LSM6P62312 80 aaKnown RBP14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 TEKQ02763 1124 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 RFX4Q33E94 735 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 CCDC92Q53HC0 331 aaPredicted RBP14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 SPRNQ5BIV9 151 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 C1orf94Q6P1W5 598 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 ARL9Q6T311 187 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 JAZF1Q86VZ6 243 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 C1orf174Q8IYL3 243 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 FITM2Q8N6M3 262 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 NPEPL1Q8NDH3 523 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 SPATA3Q8NHX4 192 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 ELMOD3Q96FG2 381 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 SAMD8Q96LT4 415 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 NMNAT3Q96T66 252 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 IFT27Q9BW83 186 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 TBCCD1Q9NVR7 557 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 CGGBP1Q9UFW8 167 aaPredicted RBP14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 TMCC3Q9ULS5 477 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 GRIP1Q9Y3R0 1128 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 WIPI2Q9Y4P8 454 aa14.61□□□□□ -0.07
CDC42BPB-208ENST00000561271 IGLV1-36A0A0B4J1U3 117 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 RER1O15258 196 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 MSMBP08118 114 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 DBHP09172 617 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 HIST1H1CP16403 213 aaKnown RBP14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 GSTM3P21266 225 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 GSSP48637 474 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 PSG7Q13046 419 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 HFEQ30201 348 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 MTX3Q5HYI7 312 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 PGBD2Q6P3X8 592 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 DNM1P34Q6PK57 102 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 ZNF620Q6ZNG0 422 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 ZNF771Q7L3S4 317 aaPredicted RBP14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 SDR9C7Q8NEX9 313 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 OR9Q2Q8NGE9 314 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 OR4K13Q8NH42 304 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 OR1F12Q8NHA8 337 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 TMEM158Q8WZ71 300 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 RPRD1BQ9NQG5 326 aaKnown RBP14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 CYSLTR2Q9NS75 346 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 LHFPL6Q9Y693 200 aa14.6□□□□□ -0.07
CDC42BPB-208ENST00000561271 RENP00797 406 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 ADH4P08319 380 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 CRABP1P29762 137 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 SRP14P37108 136 aaKnown RBP14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 IFNGR2P38484 337 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 ERFP50548 548 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 KCNMB1Q16558 191 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 KRTAP24-1Q3LI83 254 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 SPATS1Q496A3 300 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 ZMAT1Q5H9K5 638 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 CORO6Q6QEF8 472 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 OR51F2Q8NH61 342 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 CCL17Q92583 94 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 TMEM186Q96B77 213 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 CCT8L2Q96SF2 557 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 EGLN1Q9GZT9 426 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 EGLN3Q9H6Z9 239 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 ZNF665Q9H7R5 613 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 HIF1ANQ9NWT6 349 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 ACTR3BQ9P1U1 418 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 PURGQ9UJV8 347 aaKnown RBP14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 B9D1Q9UPM9 204 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 STARD10Q9Y365 291 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 LYVE1Q9Y5Y7 322 aa14.59□□□□□ -0.07
CDC42BPB-208ENST00000561271 B2RBV5 119 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 ARPC3O15145 178 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 UBOX5O94941 541 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 NOS3P29474 1203 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 RBMXP38159 391 aaKnown RBP14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 LIPAP38571 399 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 TNFAIP6P98066 277 aaPredicted RBP14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 TSPAN31Q12999 210 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 CLEC12AQ5QGZ9 265 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 PGM2L1Q6PCE3 622 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 LINC00346Q8IVM7 164 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 OR6V1Q8N148 313 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 SLC26A10Q8NG04 563 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 GNPDA2Q8TDQ7 276 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 TIMD4Q96H15 378 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 BTBD10Q9BSF8 475 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 SRA1Q9HD15 236 aaKnown RBP14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 DCAF16Q9NXF7 216 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 KLHL21Q9UJP4 597 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 ZDHHC8Q9ULC8 765 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 CDH10Q9Y6N8 788 aa14.58□□□□□ -0.08
CDC42BPB-208ENST00000561271 TCRBV5S2A0A599 114 aa14.57□□□□□ -0.08
CDC42BPB-208ENST00000561271 ISPDA4D126 451 aa14.57□□□□□ -0.08
CDC42BPB-208ENST00000561271 OR6C68A6NDL8 312 aa14.57□□□□□ -0.08
CDC42BPB-208ENST00000561271 DEAF1O75398 565 aaPredicted RBP14.57□□□□□ -0.08
CDC42BPB-208ENST00000561271 CD55P08174 381 aa14.57□□□□□ -0.08
CDC42BPB-208ENST00000561271 KITLGP21583 273 aa14.57□□□□□ -0.08
CDC42BPB-208ENST00000561271 PCMT1P22061 227 aa14.57□□□□□ -0.08
CDC42BPB-208ENST00000561271 THBS2P35442 1172 aa14.57□□□□□ -0.08
CDC42BPB-208ENST00000561271 MNAT1P51948 309 aa14.57□□□□□ -0.08
CDC42BPB-208ENST00000561271 HIST1H3AP68431 136 aa14.57□□□□□ -0.08
CDC42BPB-208ENST00000561271 PPP1R8Q12972 351 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms