RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 IGLV1-44P01699 117 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 HLA-DPB1P04440 258 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 HMGN1P05114 100 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 CD1AP06126 327 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 PNMTP11086 282 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 FPR3P25089 353 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 PTAFRP25105 342 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 CD40P25942 277 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 MPGP29372 298 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 TNFSF8P32971 234 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 SDC2P34741 201 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 GIPRP48546 466 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 CDH11P55287 796 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 TPTEP56180 551 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 OR2B6P58173 313 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 ZNF91Q05481 1191 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 ST3GAL3Q11203 375 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 TSPAN31Q12999 210 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 MED22Q15528 200 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 TSTQ16762 297 aaKnown RBP6.01□□□□□ -1.45
SPG11-224ENST00000561268 DUSP7Q16829 419 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 FAM69AQ5T7M9 428 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 C1orf140Q5VVS0 124 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 RPL13AP3Q6NVV1 102 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 SLC27A4Q6P1M0 643 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 TMEM53Q6P2H8 277 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 NHLRC1Q6VVB1 395 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 RASSF6Q6ZTQ3 369 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 LINGO2Q7L985 606 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 ZNF100Q8IYN0 542 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 RNF113BQ8IZP6 322 aaKnown RBP6.01□□□□□ -1.45
SPG11-224ENST00000561268 TCTE3Q8IZS6 198 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 TMEM123Q8N131 208 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 TMEM99Q8N816 258 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 FAM169BQ8N8A8 192 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 TMEM163Q8TC26 289 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 SLC7A13Q8TCU3 470 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 ZNF486Q96H40 463 aaPredicted RBP6.01□□□□□ -1.45
SPG11-224ENST00000561268 CMTM3Q96MX0 182 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 SLC38A2Q96QD8 506 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 SDHCQ99643 169 aaPredicted RBP6.01□□□□□ -1.45
SPG11-224ENST00000561268 CHCHD6Q9BRQ6 235 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 RHNO1Q9BSD3 238 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 NAA11Q9BSU3 229 aaPredicted RBP6.01□□□□□ -1.45
SPG11-224ENST00000561268 ZNF426Q9BUY5 554 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 GON7Q9BXV9 100 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 SRRQ9GZT4 340 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 OR51E2Q9H255 320 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 KCNN2Q9H2S1 579 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 ARMC7Q9H6L4 198 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 ABCB10Q9NRK6 738 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 A4GNTQ9UNA3 340 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 RASD1Q9Y272 281 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 EXOGQ9Y2C4 368 aaKnown RBP6.01□□□□□ -1.45
SPG11-224ENST00000561268 CMAHPQ9Y471 501 aa6.01□□□□□ -1.45
SPG11-224ENST00000561268 JMJD1CQ15652 2540 aa6□□□□□ -1.45
SPG11-224ENST00000561268 A0A1B0GWA3 101 aa6□□□□□ -1.45
SPG11-224ENST00000561268 OR6C65A6NJZ3 312 aa6□□□□□ -1.45
SPG11-224ENST00000561268 CENPXA8MT69 81 aa6□□□□□ -1.45
SPG11-224ENST00000561268 AKAP8O43823 692 aaKnown RBP6□□□□□ -1.45
SPG11-224ENST00000561268 OR10H3O60404 316 aa6□□□□□ -1.45
SPG11-224ENST00000561268 ENTPD6O75354 484 aa6□□□□□ -1.45
SPG11-224ENST00000561268 GPX5O75715 221 aa6□□□□□ -1.45
SPG11-224ENST00000561268 CCNKO75909 580 aa6□□□□□ -1.45
SPG11-224ENST00000561268 AKR7A3O95154 331 aa6□□□□□ -1.45
SPG11-224ENST00000561268 OR5F1O95221 314 aa6□□□□□ -1.45
SPG11-224ENST00000561268 AHSA1O95433 338 aa6□□□□□ -1.45
SPG11-224ENST00000561268 IGKV3-15P01624 115 aa6□□□□□ -1.45
SPG11-224ENST00000561268 IGHV3-9P01782 118 aa6□□□□□ -1.45
SPG11-224ENST00000561268 IGHV4-39P01824 125 aa6□□□□□ -1.45
SPG11-224ENST00000561268 IGHA1P01876 353 aa6□□□□□ -1.45
SPG11-224ENST00000561268 TP53P04637 393 aaPredicted RBP6□□□□□ -1.45
SPG11-224ENST00000561268 NR4A1P22736 598 aa6□□□□□ -1.45
SPG11-224ENST00000561268 CXCR1P25024 350 aa6□□□□□ -1.45
SPG11-224ENST00000561268 ERP29P30040 261 aaKnown RBP6□□□□□ -1.45
SPG11-224ENST00000561268 GRK5P34947 590 aa6□□□□□ -1.45
SPG11-224ENST00000561268 RAG2P55895 527 aa6□□□□□ -1.45
SPG11-224ENST00000561268 ATP5J2P56134 94 aa6□□□□□ -1.45
SPG11-224ENST00000561268 TAS2R43P59537 309 aa6□□□□□ -1.45
SPG11-224ENST00000561268 LSM3P62310 102 aaKnown RBP6□□□□□ -1.45
SPG11-224ENST00000561268 FAPQ12884 760 aa6□□□□□ -1.45
SPG11-224ENST00000561268 OR7A5Q15622 319 aa6□□□□□ -1.45
SPG11-224ENST00000561268 STK11Q15831 433 aa6□□□□□ -1.45
SPG11-224ENST00000561268 ZNF311Q5JNZ3 666 aa6□□□□□ -1.45
SPG11-224ENST00000561268 SLC35F1Q5T1Q4 408 aa6□□□□□ -1.45
SPG11-224ENST00000561268 NXNL2Q5VZ03 156 aa6□□□□□ -1.45
SPG11-224ENST00000561268 MZT2AQ6P582 158 aa6□□□□□ -1.45
SPG11-224ENST00000561268 TMEM108Q6UXF1 575 aa6□□□□□ -1.45
SPG11-224ENST00000561268 CLEC9AQ6UXN8 241 aa6□□□□□ -1.45
SPG11-224ENST00000561268 CREB3L2Q70SY1 520 aa6□□□□□ -1.45
SPG11-224ENST00000561268 ZNF627Q7L945 461 aa6□□□□□ -1.45
SPG11-224ENST00000561268 TPRA1Q86W33 373 aa6□□□□□ -1.45
SPG11-224ENST00000561268 GID4Q8IVV7 300 aa6□□□□□ -1.45
SPG11-224ENST00000561268 ZNF485Q8NCK3 441 aa6□□□□□ -1.45
SPG11-224ENST00000561268 GPR32P1Q8NGA4 272 aa6□□□□□ -1.45
SPG11-224ENST00000561268 OR9Q2Q8NGE9 314 aa6□□□□□ -1.45
SPG11-224ENST00000561268 OR1K1Q8NGR3 316 aa6□□□□□ -1.45
SPG11-224ENST00000561268 HAVCR2Q8TDQ0 301 aa6□□□□□ -1.45
SPG11-224ENST00000561268 GNPDA2Q8TDQ7 276 aa6□□□□□ -1.45
SPG11-224ENST00000561268 SMAP2Q8WU79 429 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms