RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 RTN4RL2Q86UN3 420 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 FOXRED2Q8IWF2 684 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 CSNK1A1LQ8N752 337 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 RCBTB1Q8NDN9 531 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 ZNF563Q8TA94 476 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 SECTM1Q8WVN6 248 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 SMIM10Q96HG1 83 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 TSPAN32Q96QS1 320 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 SLCO5A1Q9H2Y9 848 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 SERGEFQ9UGK8 458 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 PCOLCE2Q9UKZ9 415 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 COL4A6Q14031 1691 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 TBC1D3DA0A087WVF3 549 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 POM121BA6NF01 834 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 TBC1D3LB9A6J9 549 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 FBXO24O75426 580 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 PMP2P02689 132 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 TBC1D3HP0C7X1 549 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 EGR3Q06889 387 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 EBPQ15125 230 aaKnown RBP14.83□□□□□ -0.04
TPM1-228ENST00000560975 ZNHIT3Q15649 155 aaPredicted RBP14.83□□□□□ -0.04
TPM1-228ENST00000560975 ISXQ2M1V0 245 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 TBC1D3CQ6IPX1 549 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 TBC1D3Q8IZP1 549 aaPredicted RBP14.83□□□□□ -0.04
TPM1-228ENST00000560975 ZNF561Q8N587 486 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 LPAR4Q99677 370 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 NUDT9Q9BW91 350 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 SRMSQ9H3Y6 488 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 FN3KRPQ9HA64 309 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 B9D1Q9UPM9 204 aa14.83□□□□□ -0.04
TPM1-228ENST00000560975 PMS2P1A4D2B8 440 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 WIPF3A6NGB9 483 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 HIDE1A8MVS5 230 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 IFNA6P05013 189 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 SPARCP09486 303 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 PVRP15151 417 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 HTRA3P83110 453 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 RPL18Q07020 188 aaKnown RBP14.82□□□□□ -0.04
TPM1-228ENST00000560975 ZNF74Q16587 644 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 POMZP3Q6PJE2 187 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 RD3Q7Z3Z2 195 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 GRASPQ7Z6J2 395 aaPredicted RBP14.82□□□□□ -0.04
TPM1-228ENST00000560975 ASB5Q8WWX0 329 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 POLE3Q9NRF9 147 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 DEC1Q9P2X7 70 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 SPACA6W5XKT8 324 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 DUS4LO95620 317 aaKnown RBP14.82□□□□□ -0.04
TPM1-228ENST00000560975 CXCL10P02778 98 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 CEBPBP17676 345 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 PI3P19957 117 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 DRD3P35462 400 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 ARRB1P49407 418 aaPredicted RBP14.82□□□□□ -0.04
TPM1-228ENST00000560975 SLC17A1Q14916 467 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 NCMAPQ5T1S8 102 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 ADAM5Q6NVV9 412 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 OR51F2Q8NH61 342 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 INTS12Q96CB8 462 aaKnown RBP14.82□□□□□ -0.04
TPM1-228ENST00000560975 IP6K3Q96PC2 410 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 GPX7Q96SL4 187 aaPredicted RBP14.82□□□□□ -0.04
TPM1-228ENST00000560975 TIMM29Q9BSF4 260 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 COLEC10Q9Y6Z7 277 aa14.82□□□□□ -0.04
TPM1-228ENST00000560975 UNC80Q8N2C7 3258 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 KIF26BQ2KJY2 2108 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 C11orf98E9PRG8 122 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 LMX1BO60663 402 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 RENP00797 406 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 CD2P06729 351 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 OR8U8P0C7N1 319 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 DNASE1L1P49184 302 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 HGFACQ04756 655 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 RPL7L1Q6DKI1 246 aaKnown RBP14.81□□□□□ -0.04
TPM1-228ENST00000560975 DRAM2Q6UX65 266 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 LRRC75AQ8NAA5 344 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 OTOSQ8NHW6 89 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 ADAMTS17Q8TE56 1095 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 KIRREL1Q96J84 757 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 ZNF587Q96SQ5 575 aaPredicted RBP14.81□□□□□ -0.04
TPM1-228ENST00000560975 TBC1D29Q9UFV1 150 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 PILRAQ9UKJ1 303 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 HIF3AQ9Y2N7 669 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 TMEM14AQ9Y6G1 99 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 ATG2BQ96BY7 2078 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 VCANP13611 3396 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 FANCMQ8IYD8 2048 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 URADA6NGE7 173 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 M0R036 132 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 CYR61O00622 381 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 RNF212Q495C1 297 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 MARCH3Q86UD3 253 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 ZDHHC22Q8N966 263 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 OR4D6Q8NGJ1 314 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 RNF128Q8TEB7 428 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 RSPRY1Q96DX4 576 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 SLC17A9Q9BYT1 436 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 EGLN1Q9GZT9 426 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 METTL1Q9UBP6 276 aaKnown RBP14.81□□□□□ -0.04
TPM1-228ENST00000560975 CACFD1Q9UGQ2 172 aa14.81□□□□□ -0.04
TPM1-228ENST00000560975 LY86O95711 162 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 ADH1CP00326 375 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 AGAP20933 346 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms