RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 AP1ARQ63HQ0 302 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 TMEM150AQ86TG1 271 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 PRELID2Q8N945 189 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 SPANXA2-OT1Q8N9U9 137 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 ST20-AS1Q8NBB2 130 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 KCNG3Q8TAE7 436 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 SLC7A13Q8TCU3 470 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 SLC2A14Q8TDB8 520 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 C1orf198Q9H425 327 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 TMCC3Q9ULS5 477 aa2.09□□□□□ -2.07
PSMA4-221ENST00000560842 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.08
PSMA4-221ENST00000560842 OR6C74A6NCV1 312 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 FAM47DPA6NHR8 397 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 ZNF716A6NP11 495 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 H0Y8G0 127 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 CHMLP26374 656 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 DCKP27707 260 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 CSNK1EP49674 416 aaKnown RBP2.08□□□□□ -2.08
PSMA4-221ENST00000560842 SULT1E1P49888 294 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 CDH6P55285 790 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 SYNJ2BPP57105 145 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 VSX2P58304 361 aaPredicted RBP2.08□□□□□ -2.08
PSMA4-221ENST00000560842 ACTR3P61158 418 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 CRADDP78560 199 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 RCAN2Q14206 197 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 RNASE13Q5GAN3 156 aaKnown RBP2.08□□□□□ -2.08
PSMA4-221ENST00000560842 WDFY1Q8IWB7 410 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 ZFP41Q8N8Y5 198 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 LINC00304Q8N9R0 145 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 C11orf72Q8NBR9 251 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 OR7G2Q8NG99 324 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 OR10AD1Q8NGE0 317 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 FBXO32Q969P5 355 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 DNAJC1Q96KC8 554 aaKnown RBP2.08□□□□□ -2.08
PSMA4-221ENST00000560842 TEKT3Q9BXF9 490 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 PKIBQ9C010 78 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 TMEM9BQ9NQ34 198 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 C8orf17Q9NRJ1 99 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 PALLDQ8WX93 1383 aa2.08□□□□□ -2.08
PSMA4-221ENST00000560842 CENPVL3A0A0U1RRI6 287 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 AQP8O94778 261 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 H6PDO95479 791 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 HCAR3P49019 387 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 P2RX1P51575 399 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 ACLYP53396 1101 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 CCNA1P78396 465 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 SLC39A6Q13433 755 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 KIR2DS1Q14954 304 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 NPSR1Q6W5P4 371 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 OR9A2Q8NGT5 310 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 ACMSDQ8TDX5 336 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 SLC29A1Q99808 456 aa2.07□□□□□ -2.08
PSMA4-221ENST00000560842 EXOSC4Q9NPD3 245 aaKnown RBP2.07□□□□□ -2.08
PSMA4-221ENST00000560842 LYRM9A8MSI8 78 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 LGALS9O00182 355 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 CHST1O43916 411 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 SEMA3DO95025 777 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 ZNF688P0C7X2 276 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 CT45A6P0DMU7 189 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 CT45A5P0DMU8 189 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 CT45A7P0DMV0 189 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 IL1RNP18510 177 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 TNNI1P19237 187 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 GFERP55789 205 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 ATP5IP56385 69 aaPredicted RBP2.06□□□□□ -2.08
PSMA4-221ENST00000560842 PIGHQ14442 188 aaPredicted RBP2.06□□□□□ -2.08
PSMA4-221ENST00000560842 CHRNA6Q15825 494 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 PGGHGQ32M88 737 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 CT45A1Q5HYN5 189 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 H3F3CQ6NXT2 135 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 IQCKQ8N0W5 287 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 CT45A3Q8NHU0 189 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 KIFAP3Q92845 792 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 SAMD10Q9BYL1 202 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 FGF23Q9GZV9 251 aaPredicted RBP2.06□□□□□ -2.08
PSMA4-221ENST00000560842 UXTQ9UBK9 157 aaPredicted RBP2.06□□□□□ -2.08
PSMA4-221ENST00000560842 SCN1AP35498 2009 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 ADGRL1O94910 1474 aa2.06□□□□□ -2.08
PSMA4-221ENST00000560842 DOCK8Q8NF50 2099 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 IGHV3OR16-8A0A075B7F1 116 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 IGKV1-8A0A0C4DH67 115 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 IGHV7-4-1A0A0J9YVY3 117 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 C5orf63A6NC05 138 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 SMKR1H3BMG3 65 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 SERPINE2P07093 398 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 ZNF806P0C7X5 589 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 COL8A2P25067 703 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 PPP1CBP62140 327 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 PPP1R7Q15435 360 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 SNRNP35Q16560 246 aaKnown RBP2.05□□□□□ -2.08
PSMA4-221ENST00000560842 MAJINQ3KP22 176 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 MPV17L2Q567V2 206 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 TCEAL5Q5H9L2 206 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 FAM222AQ5U5X8 452 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 SLC8B1Q6J4K2 584 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 SNX20Q7Z614 316 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 CALHM3Q86XJ0 350 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 COX18Q8N8Q8 333 aa2.05□□□□□ -2.08
PSMA4-221ENST00000560842 OR56B2PQ8NGI1 322 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms