RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ADRA2CP18825 462 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 ELK1P19419 428 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 CTSSP25774 331 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 CFPP27918 469 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 ZNF84P51523 738 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 PSMD7P51665 324 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 PSMA6P60900 246 aaKnown RBP11.4□□□□□ -0.59
SNX1-211ENST00000560829 ENDOGQ14249 297 aaKnown RBP11.4□□□□□ -0.59
SNX1-211ENST00000560829 TMEM244Q5VVB8 128 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 KLHL24Q6TFL4 600 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 AAED1Q7RTV5 226 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 SETD6Q8TBK2 473 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 ASB5Q8WWX0 329 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 SLC25A18Q9H1K4 315 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 SP140LQ9H930 580 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 DDX28Q9NUL7 540 aaKnown RBP11.4□□□□□ -0.59
SNX1-211ENST00000560829 FAIMQ9NVQ4 179 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 HHLA2Q9UM44 414 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 SPATA2Q9UM82 520 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 GTF2A1LQ9UNN4 478 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 PTPRBP23467 1997 aa11.4□□□□□ -0.59
SNX1-211ENST00000560829 PAHP00439 452 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 IL7P13232 177 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 SGCAQ16586 387 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 BAK1Q16611 211 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 ODF4Q2M2E3 257 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 BCL2L15Q5TBC7 163 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 FAM27BQ5VT28 67 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 ELMOD2Q8IZ81 293 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 SAMD12Q8N8I0 201 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 CPT1CQ8TCG5 803 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 ABHD3Q8WU67 409 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 TSEN15Q8WW01 171 aaKnown RBP11.39□□□□□ -0.59
SNX1-211ENST00000560829 RNF122Q9H9V4 155 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 TBCCD1Q9NVR7 557 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 NUFIP1Q9UHK0 495 aaKnown RBP11.39□□□□□ -0.59
SNX1-211ENST00000560829 DHDHQ9UQ10 334 aa11.39□□□□□ -0.59
SNX1-211ENST00000560829 TRAV8-7A0A075B6U6 113 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 LOC107986453A0A1B0GWG9 222 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 RER1O15258 196 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 PTTG1O95997 202 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 APOA1P02647 267 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 CD2P06729 351 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 FSTP19883 344 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 DEFA1P59665 94 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 DEFA3P59666 94 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 GRB2P62993 217 aaKnown RBP11.38□□□□□ -0.59
SNX1-211ENST00000560829 ASPHD2Q6ICH7 369 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 OR8H2Q8N162 312 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 GJC3Q8NFK1 279 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 HTRA1Q92743 480 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 ZNF775Q96BV0 537 aaPredicted RBP11.38□□□□□ -0.59
SNX1-211ENST00000560829 KCNJ15Q99712 375 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 RBM24Q9BX46 236 aaKnown RBP11.38□□□□□ -0.59
SNX1-211ENST00000560829 PBOV1Q9GZY1 135 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 C14orf119Q9NWQ9 140 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 EXTL2Q9UBQ6 330 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 CDV3Q9UKY7 258 aaKnown RBP11.38□□□□□ -0.59
SNX1-211ENST00000560829 MCTS1Q9ULC4 181 aaKnown RBP11.38□□□□□ -0.59
SNX1-211ENST00000560829 FOXJ3Q9UPW0 622 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 NCKAP5O14513 1909 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 MED12Q93074 2177 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 FAM25AB3EWG3 89 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 FAM25CB3EWG5 89 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 FAM25GB3EWG6 89 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 MAGEB3O15480 346 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 SYNGR4O95473 234 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 HLA-DQB1P01920 261 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 TTRP02766 147 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 ITGB2P05107 769 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 EIF4EP06730 217 aaKnown RBP11.38□□□□□ -0.59
SNX1-211ENST00000560829 CSF3P09919 207 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 CD37P11049 281 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 CPN1P15169 458 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 AZGP1P25311 298 aaKnown RBP11.38□□□□□ -0.59
SNX1-211ENST00000560829 HSD11B1P28845 292 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 STK11Q15831 433 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 DEFB109BQ30KR1 87 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 RNFT1Q5M7Z0 435 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 GPR137CQ8N3F9 429 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 POC5Q8NA72 575 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 OR5H6Q8NGV6 325 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 ZNF837Q96EG3 531 aaPredicted RBP11.38□□□□□ -0.59
SNX1-211ENST00000560829 SMAD5Q99717 465 aaKnown RBP11.38□□□□□ -0.59
SNX1-211ENST00000560829 LINC00470Q9BZP3 86 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 BCO1Q9HAY6 547 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 CSAG2Q9Y5P2 127 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 LIPGQ9Y5X9 500 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 KCNMB2Q9Y691 235 aa11.38□□□□□ -0.59
SNX1-211ENST00000560829 GVINP1Q7Z2Y8 2422 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 TRGV5A0A0B4J1U4 118 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 TRAV17A0A0B4J275 112 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 ZNF724A8MTY0 619 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 EFSO43281 561 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 ACSM4P0C7M7 580 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 CALCBP10092 127 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 SNRPBP14678 240 aaKnown RBP11.37□□□□□ -0.59
SNX1-211ENST00000560829 IGFBP3P17936 291 aaPredicted RBP11.37□□□□□ -0.59
SNX1-211ENST00000560829 TALDO1P37837 337 aa11.37□□□□□ -0.59
SNX1-211ENST00000560829 SCAND1P57086 179 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms