RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 GAS1P54826 345 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 RBM39Q14498 530 aaKnown RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 RSU1Q15404 277 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ANKRD55Q3KP44 614 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 SLC25A30Q5SVS4 291 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 PAQR3Q6TCH7 311 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 RNF165Q6ZSG1 346 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 TMPRSS11BQ86T26 416 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 CATSPERDQ86XM0 798 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 GPR137CQ8N3F9 429 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF614Q8N883 585 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 UBAC2Q8NBM4 344 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF485Q8NCK3 441 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ASB13Q8WXK3 278 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 MYLIPQ8WY64 445 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ARL11Q969Q4 196 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 IGSF21Q96ID5 467 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 WRAP53Q9BUR4 548 aaKnown RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ALG8Q9BVK2 526 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 SUCNR1Q9BXA5 334 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 TMEM185BQ9H7F4 350 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 TUBA4BQ9H853 241 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 NOX3Q9HBY0 568 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 RCC2Q9P258 522 aaKnown RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 UXTQ9UBK9 157 aaPredicted RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 EXOGQ9Y2C4 368 aaKnown RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 PCNTO95613 3336 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 OR51F1A6NGY5 319 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 CD8B2A6NJW9 211 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 IQCF5A8MTL0 148 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 OR7A17O14581 309 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 FGF16O43320 207 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 EMC8O43402 210 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 PRAMEF11O60813 436 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 KNG1P01042 644 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 CD8BP10966 210 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 CEACAM1P13688 526 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 PPP2R1BP30154 601 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 GDNFP39905 211 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ART1P52961 327 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 RPS14P62263 151 aaKnown RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 CSNK2A1P68400 391 aaPredicted RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 PITX1P78337 314 aaPredicted RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 HGFACQ04756 655 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 BCL2L1Q07817 233 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 HNF4GQ14541 408 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 INSL4Q14641 139 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 NDUFAF6Q330K2 333 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 XKR6Q5GH73 641 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 NKAPLQ5M9Q1 402 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 NSUN5P2Q63ZY6 315 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ZNF770Q6IQ21 691 aaPredicted RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 CXCL17Q6UXB2 119 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ABHD13Q7L211 337 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 C6orf120Q7Z4R8 191 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 PRSS58Q8IYP2 241 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 LRRC18Q8N456 261 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 TCEANCQ8N8B7 351 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 CSNK2A3Q8NEV1 391 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 OR5M1Q8NGP8 315 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 OR1J4Q8NGS1 313 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ERGIC1Q969X5 290 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 ZFP3Q96NJ6 502 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 TEX101Q9BY14 249 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 HIPK2Q9H2X6 1198 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 SFXN1Q9H9B4 322 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 NMNAT1Q9HAN9 279 aaPredicted RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 LRTM1Q9HBL6 345 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 HRASLSQ9HDD0 168 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 FGF20Q9NP95 211 aaPredicted RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 RASD1Q9Y272 281 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 SLC35A3Q9Y2D2 325 aa6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 EXOSC1Q9Y3B2 195 aaKnown RBP6.03□□□□□ -1.44
TSPAN3-209ENST00000560715 THSD7BQ9C0I4 1608 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 KANTRA0A1W2PQU2 76 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 FBLL1A6NHQ2 334 aaKnown RBP6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 C9orf172C9J069 976 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 LEFTY2O00292 366 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 CCL22O00626 93 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF25P17030 456 aaPredicted RBP6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 ACKR3P25106 362 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 GLP1RP43220 463 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 NKX2-1P43699 371 aaPredicted RBP6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 RAP1AP62834 184 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 HMGCS1Q01581 520 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 ADIGQ0VDE8 80 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 PJVKQ0ZLH3 352 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 RAB40BQ12829 278 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 GAGE1Q13065 139 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 MPPED2Q15777 294 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 TCTN1Q2MV58 587 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 PLEKHN1Q494U1 663 aaPredicted RBP6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 AWAT1Q58HT5 328 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 WSCD1Q658N2 575 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 CLEC20AQ6ZU45 233 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 PAQR9Q6ZVX9 377 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 GOLGA7Q7Z5G4 137 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 PARGQ86W56 976 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 KCNRGQ8N5I3 272 aa6.02□□□□□ -1.45
TSPAN3-209ENST00000560715 COMMD1Q8N668 190 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms