RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 RER1O15258 196 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 ICMTO60725 284 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 PPP1R3DO95685 299 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 PNPP00491 289 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 ADH4P08319 380 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 DBHP09172 617 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 COX5BP10606 129 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 ADRA2CP18825 462 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 GSTM3P21266 225 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 ERFP50548 548 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 FXYD6P3P58550 94 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 LCN2P80188 198 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 AQP6Q13520 282 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 MEP1BQ16820 701 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 CCDC92Q53HC0 331 aaPredicted RBP8.65□□□□□ -1.02
LDLR-214ENST00000560628 CORO6Q6QEF8 472 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 DPY19L2P2Q6ZN68 376 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 Q6ZR03 302 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 ZER1Q7Z7L7 766 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 PEG10Q86TG7 708 aaKnown RBP8.65□□□□□ -1.02
LDLR-214ENST00000560628 OR5AS1Q8N127 324 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.65□□□□□ -1.02
LDLR-214ENST00000560628 OR1F12Q8NHA8 337 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 HAVCR1Q96D42 359 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 PYURFQ96I23 114 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 ERMAPQ96PL5 475 aaPredicted RBP8.65□□□□□ -1.02
LDLR-214ENST00000560628 DIRC2Q96SL1 478 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 WACQ9BTA9 647 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 TMPRSS13Q9BYE2 586 aa8.65□□□□□ -1.02
LDLR-214ENST00000560628 SRA1Q9HD15 236 aaKnown RBP8.65□□□□□ -1.02
LDLR-214ENST00000560628 VSX1Q9NZR4 365 aaPredicted RBP8.65□□□□□ -1.02
LDLR-214ENST00000560628 SAMD4AQ9UPU9 718 aaKnown RBP8.65□□□□□ -1.02
LDLR-214ENST00000560628 FBN3Q75N90 2809 aa8.65□□□□□ -1.03
LDLR-214ENST00000560628 A0A0G2JMP0 313 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 A0A0X1KG70 313 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 DCTN6O00399 190 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 SNX3O60493 162 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 GADD45GO95257 159 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 CD55P08174 381 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 EPHA1P21709 976 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 TNFSF4P23510 183 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 PRDX6P30041 224 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 RPS6KA3P51812 740 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 LSM6P62312 80 aaKnown RBP8.64□□□□□ -1.03
LDLR-214ENST00000560628 SPIBQ01892 262 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 SLC3A1Q07837 685 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 HLXQ14774 488 aaPredicted RBP8.64□□□□□ -1.03
LDLR-214ENST00000560628 ZMAT1Q5H9K5 638 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 DCAF12L2Q5VW00 463 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 SMARCD3Q6STE5 483 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 CPLX4Q7Z7G2 160 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 ATG16L2Q8NAA4 619 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 NPEPL1Q8NDH3 523 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 OR4M2Q8NGB6 313 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 ITLN1Q8WWA0 313 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 PTP4A1Q93096 173 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 DHRS1Q96LJ7 313 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 GPX7Q96SL4 187 aaPredicted RBP8.64□□□□□ -1.03
LDLR-214ENST00000560628 CDRT15Q96T59 188 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 FUZQ9BT04 418 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 C7orf69Q9H7B7 122 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 GORASP2Q9H8Y8 452 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 KRCC1Q9NPI7 259 aaPredicted RBP8.64□□□□□ -1.03
LDLR-214ENST00000560628 TMEM106BQ9NUM4 274 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 PTTG3PQ9NZH4 202 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 CGGBP1Q9UFW8 167 aaPredicted RBP8.64□□□□□ -1.03
LDLR-214ENST00000560628 PCDHB10Q9UN67 800 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 B9D1Q9UPM9 204 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 POLR1DQ9Y2S0 133 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 NPTNQ9Y639 398 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 ARHGAP32A7KAX9 2087 aa8.64□□□□□ -1.03
LDLR-214ENST00000560628 A0A0A6YYJ9 748 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 IGHV3-64DA0A0J9YX35 117 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 OR6C6A6NF89 314 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 TXNDC12O95881 172 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 KITLGP21583 273 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 TUBG1P23258 451 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 ZFP36P26651 326 aaKnown RBP8.63□□□□□ -1.03
LDLR-214ENST00000560628 CRABP1P29762 137 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 GYS2P54840 703 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 SMIM11AP58511 58 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 KCNMB1Q16558 191 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 RFX4Q33E94 735 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 OR2T2Q6IF00 324 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 LEG1Q6P5S2 330 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 ADCK1Q86TW2 530 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 OR6V1Q8N148 313 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 OR4K13Q8NH42 304 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 ST7LQ8TDW4 575 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 ZNF418Q8TF45 676 aaPredicted RBP8.63□□□□□ -1.03
LDLR-214ENST00000560628 SAMD8Q96LT4 415 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 NMNAT3Q96T66 252 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 IFT27Q9BW83 186 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 TUBG2Q9NRH3 451 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 ARL8BQ9NVJ2 186 aa8.63□□□□□ -1.03
LDLR-214ENST00000560628 IGLV1-36A0A0B4J1U3 117 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 J3QLI3 93 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 OR10H3O60404 316 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 ZNF205O95201 554 aa8.62□□□□□ -1.03
LDLR-214ENST00000560628 RENP00797 406 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms