RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 ASH2LQ9UBL3 628 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 PRSS50Q9UI38 385 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 GDF2Q9UK05 429 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 IKZF2Q9UKS7 526 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 STUB1Q9UNE7 303 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 GABRA5P31644 462 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 RPS11P62280 158 aaKnown RBP eCLIP12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 MRPS34P82930 218 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 SLC3A1Q07837 685 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 SF3B4Q15427 424 aaKnown RBP eCLIP12.57□□□□□ -0.41e-8■■■■■ 55.8
RABGGTA-209ENST00000559551 ZNF404Q494X3 552 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 RIPPLY2Q5TAB7 128 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 FAM180AQ6UWF9 173 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 ZNF679Q8IYX0 411 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 GCNT2Q8N0V5 402 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 GPR137CQ8N3F9 429 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 PRSS35Q8N3Z0 413 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 RPRMLQ8N4K4 120 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 POC5Q8NA72 575 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 FGFBP3Q8TAT2 258 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 CPT1CQ8TCG5 803 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 RNF133Q8WVZ7 376 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 RGP1Q92546 391 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 PPP1R14AQ96A00 147 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 SNRNP40Q96DI7 357 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 FBXO17Q96EF6 278 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 TTYH2Q9BSA4 534 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 LINC00470Q9BZP3 86 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 NELFAQ9H3P2 528 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 TMEM38BQ9NVV0 291 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 TUBD1Q9UJT1 453 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 LRP12Q9Y561 859 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 FAM215AQ9Y5M1 114 aa12.57□□□□□ -0.4
RABGGTA-209ENST00000559551 SHISA3A0PJX4 238 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 PHYHO14832 338 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 RER1O15258 196 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 SS18L1O75177 396 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 KRT8P05787 483 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 NR2C1P13056 603 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 MSR1P21757 451 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 KIR3DL2P43630 455 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 GBX2P52951 348 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 ZNF45Q02386 682 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 MFGE8Q08431 387 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 GPR50Q13585 617 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 OR7E24Q6IFN5 339 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 KDF1Q8NAX2 398 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 OR10H5Q8NGA6 315 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 ASB17Q8WXJ9 295 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 GHSRQ92847 366 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 PDCD1LG2Q9BQ51 273 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 HDHD5Q9BXW7 423 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 DCSTAMPQ9H295 470 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 PPIL3Q9H2H8 161 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 C12orf49Q9H741 205 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 FRRS1LQ9P0K9 344 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 PCNX1Q96RV3 2341 aa12.56□□□□□ -0.4
RABGGTA-209ENST00000559551 SC5DO75845 299 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 TOXO94900 526 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 B4GALT1P15291 398 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 PSMA1P25786 263 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 TGM4P49221 684 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 LSM6P62312 80 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 HIST1H3AP68431 136 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 FOXF2Q12947 444 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 HIST2H3PS2Q5TEC6 136 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 ZNF585AQ6P3V2 769 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 RPL22L1Q6P5R6 122 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 HIST2H3AQ71DI3 136 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 KCTD20Q7Z5Y7 419 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 MCEMP1Q8IX19 187 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 LRRC18Q8N456 261 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 CAPSLQ8WWF8 208 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 SLAMF6Q96DU3 332 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 SMIM19Q96E16 107 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 GMPPAQ96IJ6 420 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 NPAP1Q9NZP6 1156 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 CD8B2A6NJW9 211 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 AHRRA9YTQ3 701 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 RPL36A-HNRNPH2H7BZ11 118 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 GABRPO00591 440 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 ZFPL1O95159 310 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 CD8BP10966 210 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 FCGR2AP12318 317 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 GDI2P50395 445 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 DEFA1P59665 94 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 DEFA3P59666 94 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 CCDC58Q4VC31 144 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 FAM27BQ5VT28 67 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 C22orf42Q6IC83 251 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 USP43Q70EL4 1123 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 OR2G2Q8NGZ5 317 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 APH1AQ96BI3 265 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 FOXB1Q99853 325 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 CDADC1Q9BWV3 514 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 GP6Q9HCN6 339 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 EXOSC4Q9NPD3 245 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
RABGGTA-209ENST00000559551 PARPBPQ9NWS1 579 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms