RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 NPIPB9F8W1W9 429 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 NDUFS8O00217 210 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 SOCS6O14544 535 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 FRS3O43559 492 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 PRKYO43930 277 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 ZFAND5O76080 213 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 UTS2O95399 124 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 CFDP00746 253 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-216ENST00000559496 LPLP06858 475 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 H1F0P07305 194 aaKnown RBP6.29□□□□□ -1.4
ZEB1-216ENST00000559496 SPP1P10451 314 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 COX6A1P12074 109 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 CBR1P16152 277 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 CD82P27701 267 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 ABCD3P28288 659 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 LCN1P31025 176 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 FMO3P31513 532 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 RAG2P55895 527 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 LGALS4P56470 323 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 SMIM11AP58511 58 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 TAS2R41P59536 307 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 RAB2AP61019 212 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 HOXC5Q00444 222 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 CAMK2DQ13557 499 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 GANABQ14697 944 aaKnown RBP6.29□□□□□ -1.4
ZEB1-216ENST00000559496 MAD2L1BPQ15013 274 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-216ENST00000559496 PDCD1Q15116 288 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 ZSWIM7Q19AV6 140 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 CT83Q5H943 113 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 ACER2Q5QJU3 275 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 HACD4Q5VWC8 232 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 KIRREL2Q6UWL6 708 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 NDUFAF7Q7L592 441 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 FAM122BQ7Z309 247 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 PPP1R32Q7Z5V6 425 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 RANBP3LQ86VV4 465 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-216ENST00000559496 HS3ST5Q8IZT8 346 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 CLDN22Q8N7P3 220 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 OR11G2Q8NGC1 345 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 OR11H4Q8NGC9 324 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 OR4C3Q8NH37 302 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 OR52J3Q8NH60 311 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 CNIH3Q8TBE1 160 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 SNX33Q8WV41 574 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 OIT3Q8WWZ8 545 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 IMMP1LQ96LU5 166 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 PRRC1Q96M27 445 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 PITX2Q99697 317 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 KCNS3Q9BQ31 491 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 WFDC6Q9BQY6 131 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 FNDC11Q9BVV2 318 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 DEFB126Q9BYW3 111 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 MRPL37Q9BZE1 423 aaKnown RBP6.29□□□□□ -1.4
ZEB1-216ENST00000559496 SLC25A32Q9H2D1 315 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 UBQLN4Q9NRR5 601 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 ZFP57Q9NU63 452 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 NUDT15Q9NV35 164 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 DLL3Q9NYJ7 618 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 PDP1Q9P0J1 537 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-216ENST00000559496 RHCGQ9UBD6 479 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 KCND3Q9UK17 655 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 PTPRBP23467 1997 aa6.29□□□□□ -1.4
ZEB1-216ENST00000559496 PTPRZ1P23471 2315 aaPredicted RBP6.29□□□□□ -1.4
ZEB1-216ENST00000559496 LOC100506127A0A0U1RQW1 187 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 LOC101059948A0A1B0GTJ6 334 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 CDHR4A6H8M9 788 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 SERINC4A6NH21 518 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 CPSF4LA6NMK7 179 aaKnown RBP6.28□□□□□ -1.4
ZEB1-216ENST00000559496 CDRT15L2A8MXV6 281 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 C1orf196B1AJZ1 125 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 H7C1Q1 480 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 FFAR1O14842 300 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 TSPAN2O60636 221 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 ICOSLGO75144 302 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 SC5DO75845 299 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 ATG12O94817 140 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 CSTAP01040 98 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 HCKP08631 526 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 TSPAN19P0C672 248 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 LINC00614P0C842 121 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 GKN3PP0CG01 181 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 PEPDP12955 493 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 ANXA7P20073 488 aaKnown RBP6.28□□□□□ -1.4
ZEB1-216ENST00000559496 PRKACGP22612 351 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 GNALP38405 381 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 PNLIPRP2P54317 469 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 NUTF2P61970 127 aaKnown RBP6.28□□□□□ -1.4
ZEB1-216ENST00000559496 DEFA5Q01523 94 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 PIN1Q13526 163 aaPredicted RBP6.28□□□□□ -1.4
ZEB1-216ENST00000559496 GK2Q14410 553 aaPredicted RBP6.28□□□□□ -1.4
ZEB1-216ENST00000559496 EXOC3L2Q2M3D2 409 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 PYDC2Q56P42 97 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 ATPAF1Q5TC12 328 aaPredicted RBP6.28□□□□□ -1.4
ZEB1-216ENST00000559496 LIPNQ5VXI9 398 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 PLAG1Q6DJT9 500 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 C11orf88Q6PI97 169 aa6.28□□□□□ -1.4
ZEB1-216ENST00000559496 C16orf47Q6ZP98 133 aaPredicted RBP6.28□□□□□ -1.4
ZEB1-216ENST00000559496 KLBQ86Z14 1044 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms