RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, human

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-205	ENST00000559245	DEFB112	Q30KQ8	113 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	BRD3OS	Q6XYD6	125 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	IGFN1	Q86VF2	1251 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	ATG16L2	Q8NAA4	619 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	OR10S1	Q8NGN2	331 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	OR4F5	Q8NH21	305 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	LRRC8C	Q8TDW0	803 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	PTP4A1	Q93096	173 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	ZDHHC16	Q969W1	377 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	DACT3	Q96B18	629 aa	Predicted RBP	13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	HAVCR1	Q96D42	359 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	CCT8L2	Q96SF2	557 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	WAC	Q9BTA9	647 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	PRDM13	Q9H4Q3	707 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	TMBIM4	Q9HC24	238 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	EMC7	Q9NPA0	242 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	TNFRSF19	Q9NS68	423 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	BAG5	Q9UL15	447 aa		13.59	□□□□□ -0.23
CDC42BPB-205	ENST00000559245	KIR2DS1	A0A191URI9	304 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	SRRM5	B3KS81	715 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	SGCE	O43556	437 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	CYB5R3	P00387	301 aa	Predicted RBP	13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	CRYBA1	P05813	215 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	THRB	P10828	461 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	IFI30	P13284	250 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	OR1E2	P47887	323 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	RAG2	P55895	527 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	GUCY1A3	Q02108	690 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	SCRN3	Q0VDG4	424 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	FAM205BP	Q63HN1	556 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	SLC27A4	Q6P1M0	643 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	C1orf94	Q6P1W5	598 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	BRICD5	Q6PL45	260 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	FIP1L1	Q6UN15	594 aa	Known RBP	13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	OR5AS1	Q8N127	324 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	LRRC75A	Q8NAA5	344 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	NEIL1	Q96FI4	390 aa	Predicted RBP	13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	PLEKHA8	Q96JA3	519 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	COG8	Q96MW5	612 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	CITED1	Q99966	193 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	TMEM246	Q9BRR3	403 aa		13.58	□□□□□ -0.24
CDC42BPB-205	ENST00000559245		A6NIZ1	184 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245		H7C1C5	153 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	SASH3	O75995	380 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	RAP1B	P61224	184 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	LCN6	P62502	163 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	RAP1A	P62834	184 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	RELB	Q01201	579 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	OLFML2A	Q68BL7	652 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	VASH1	Q7L8A9	365 aa	Predicted RBP	13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	HDX	Q7Z353	690 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	OR10AD1	Q8NGE0	317 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	SLC7A6	Q92536	515 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	BPIFA2	Q96DR5	249 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	MEGF10	Q96KG7	1140 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	MAGEB18	Q96M61	343 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	NUDT16L1	Q9BRJ7	211 aa	Known RBP	13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	MMP27	Q9H306	513 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	MARCH7	Q9H992	704 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	C1RL	Q9NZP8	487 aa		13.57	□□□□□ -0.24
CDC42BPB-205	ENST00000559245		M0QZ24	198 aa		13.56	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	RAC2	P15153	192 aa		13.56	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	MICU2	Q8IYU8	434 aa		13.56	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	FITM2	Q8N6M3	262 aa		13.56	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	OR8B3	Q8NGG8	313 aa		13.56	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	OR51A7	Q8NH64	312 aa		13.56	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	OR8B2	Q96RD0	313 aa		13.56	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	CHIA	Q9BZP6	476 aa		13.56	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	ARMCX1	Q9P291	453 aa		13.56	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	TRAV27	A0A087WT01	109 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	IGHV3-64D	A0A0J9YX35	117 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	CLPSL1	A2RUU4	121 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	HTR3E	A5X5Y0	456 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245		H0YL77	283 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	TIMM23	O14925	209 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	NDUFA7	O95182	113 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	PITPNB	P48739	271 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	SRP9	P49458	86 aa	Known RBP	13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	FGF12	P61328	243 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	ST3GAL3	Q11203	375 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	HLX	Q14774	488 aa	Predicted RBP	13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	ZNF404	Q494X3	552 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	FAM201A	Q5SY85	155 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	GPR157	Q5UAW9	335 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	OR2T2	Q6IF00	324 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	NANOGP8	Q6NSW7	305 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245		Q6YL49	198 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	RHOU	Q7L0Q8	258 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	NLRC3	Q7RTR2	1065 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	OR8G5	Q8NG78	346 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	OR13G1	Q8NGZ3	307 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	TSPEAR	Q8WU66	669 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	NOX4	Q9NPH5	578 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	PTTG3P	Q9NZH4	202 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	CLN8	Q9UBY8	286 aa		13.55	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	LRRC30	A6NM36	301 aa		13.54	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	FSTL3	O95633	263 aa		13.54	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	BPIFB3	P59826	476 aa		13.54	□□□□□ -0.24
CDC42BPB-205	ENST00000559245	KRTAP10-3	P60369	221 aa		13.54	□□□□□ -0.24

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