RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ELFN2Q5R3F8 820 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 OTPQ5XKR4 325 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 ERICH5Q6P6B1 374 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 FKBP9P1Q75LS8 142 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 CCDC80Q76M96 950 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 HDDC2Q7Z4H3 204 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 VTCN1Q7Z7D3 282 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 CALHM3Q86XJ0 350 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 PCYOX1LQ8NBM8 494 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 OR8J3Q8NGG0 315 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 OR1J2Q8NGS2 313 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 OR1J1Q8NGS3 322 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 OR13C2Q8NGS9 318 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 SYNPRQ8TBG9 265 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 HDAC2Q92769 488 aaKnown RBP6.25□□□□□ -1.41
SPG11-213ENST00000558988 RDH5Q92781 318 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 ZNF426Q9BUY5 554 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 DENND2DQ9H6A0 471 aaPredicted RBP6.25□□□□□ -1.41
SPG11-213ENST00000558988 METTL17Q9H7H0 456 aaPredicted RBP6.25□□□□□ -1.41
SPG11-213ENST00000558988 VIPAS39Q9H9C1 493 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 HINT3Q9NQE9 182 aaKnown RBP6.25□□□□□ -1.41
SPG11-213ENST00000558988 SAR1AQ9NR31 198 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 GID8Q9NWU2 228 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 ZNF346Q9UL40 294 aaKnown RBP6.25□□□□□ -1.41
SPG11-213ENST00000558988 SNX13Q9Y5W8 968 aa6.25□□□□□ -1.41
SPG11-213ENST00000558988 COL6A5A8TX70 2615 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 IGKV1D-43A0A0B4J1Z2 117 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 SLC22A23A1A5C7 686 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 ELOVL7A1L3X0 281 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 C17orf100A8MU93 164 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 FAM220BPB1ANY3 271 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 B4DSR2 109 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 J3KTA2 159 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 PTHP01270 115 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 MT-ND5P03915 603 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 IFNW1P05000 195 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 NCK1P16333 377 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 ITGA2P17301 1181 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 ACHEP22303 614 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 STOMP27105 288 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 GCH1P30793 250 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 IFNA8P32881 189 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 KDELR2P33947 212 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 RPL4P36578 427 aaKnown RBP6.24□□□□□ -1.41
SPG11-213ENST00000558988 RBM34P42696 430 aaKnown RBP6.24□□□□□ -1.41
SPG11-213ENST00000558988 RAD52P43351 418 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 GPR4P46093 362 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 EVX1P49640 407 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 GDI2P50395 445 aaKnown RBP6.24□□□□□ -1.41
SPG11-213ENST00000558988 UCP2P55851 309 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 THEM4Q5T1C6 240 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 ARMC4Q5T2S8 1044 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 LIPNQ5VXI9 398 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 CGB2Q6NT52 195 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 FAHD2BQ6P2I3 314 aaPredicted RBP6.24□□□□□ -1.41
SPG11-213ENST00000558988 ZNF730Q6ZMV8 503 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.24□□□□□ -1.41
SPG11-213ENST00000558988 NRMQ8IXM6 262 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 ZNF101Q8IZC7 436 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 CPEB3Q8NE35 698 aaKnown RBP6.24□□□□□ -1.41
SPG11-213ENST00000558988 STON2Q8WXE9 905 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 LZICQ8WZA0 190 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 BPIFA2Q96DR5 249 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 FAHD2AQ96GK7 314 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 PRRC1Q96M27 445 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 ZNF583Q96ND8 569 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 FNDC11Q9BVV2 318 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 MRPL13Q9BYD1 178 aaKnown RBP6.24□□□□□ -1.41
SPG11-213ENST00000558988 PCDHAC1Q9H158 963 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 DECR2Q9NUI1 292 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 HIF1ANQ9NWT6 349 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 EIF3KQ9UBQ5 218 aaKnown RBP6.24□□□□□ -1.41
SPG11-213ENST00000558988 CACNG2Q9Y698 323 aa6.24□□□□□ -1.41
SPG11-213ENST00000558988 IGHV1-69-2A0A0G2JMI3 117 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 PLSCR5A0PG75 271 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 EFCAB9A8MZ26 197 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 CXCR6O00574 342 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 TCF21O43680 179 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 MSMBP08118 114 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 HOXB6P17509 224 aaKnown RBP6.23□□□□□ -1.41
SPG11-213ENST00000558988 LAP3P28838 519 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 RBMXP38159 391 aaKnown RBP6.23□□□□□ -1.41
SPG11-213ENST00000558988 MPV17P39210 176 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 GUCA1AP43080 201 aaPredicted RBP6.23□□□□□ -1.41
SPG11-213ENST00000558988 SLC9A3P48764 834 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 CENPAP49450 140 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 ZNF81P51508 661 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 SLC7A2P52569 658 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 DVL1P1P54792 670 aaPredicted RBP6.23□□□□□ -1.41
SPG11-213ENST00000558988 RPL27P61353 136 aaKnown RBP6.23□□□□□ -1.41
SPG11-213ENST00000558988 MRPS34P82930 218 aaKnown RBP6.23□□□□□ -1.41
SPG11-213ENST00000558988 LIPEQ05469 1076 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 ST3GAL3Q11203 375 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 TRAM2Q15035 370 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 TAF11Q15544 211 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 HSP90B2PQ58FF3 399 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 FGD3Q5JSP0 725 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 ZNF774Q6NX45 483 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 C1orf94Q6P1W5 598 aa6.23□□□□□ -1.41
SPG11-213ENST00000558988 TBPL2Q6SJ96 375 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms