RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 A0A1W2PRQ8 180 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 PLSCR5A0PG75 271 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 H3BSA7 217 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 NDUFB2O95178 105 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 MT-ND5P03915 603 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 SELEP16581 610 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 KITLGP21583 273 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 SDHAP31040 664 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 MSX2P35548 267 aaPredicted RBP11.41□□□□□ -0.58
VPS18-203ENST00000558855 HILS1P60008 231 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 PCBD1P61457 104 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 AQP6Q13520 282 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 DGCR6Q14129 220 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 TUSC1Q2TAM9 212 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 ANKDD1AQ495B1 522 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 DCAF12L2Q5VW00 463 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 GLYATQ6IB77 296 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.41□□□□□ -0.58
VPS18-203ENST00000558855 PEG10Q86TG7 708 aaKnown RBP11.41□□□□□ -0.58
VPS18-203ENST00000558855 ALDH16A1Q8IZ83 802 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 ZDHHC22Q8N966 263 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 DEFB108BQ8NET1 73 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 OR2Z1Q8NG97 314 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 RAB1CQ92928 201 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 DVL3Q92997 716 aaPredicted RBP11.41□□□□□ -0.58
VPS18-203ENST00000558855 ELAC2Q9BQ52 826 aaKnown RBP11.41□□□□□ -0.58
VPS18-203ENST00000558855 C1QTNF5Q9BXJ0 243 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 ANKRD19PQ9H560 264 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 ELOVL3Q9HB03 270 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 TMEM106BQ9NUM4 274 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 DCAF13Q9NV06 445 aaKnown RBP11.41□□□□□ -0.58
VPS18-203ENST00000558855 TBCCD1Q9NVR7 557 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 PLEK2Q9NYT0 353 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 NDRG4Q9ULP0 352 aaKnown RBP11.41□□□□□ -0.58
VPS18-203ENST00000558855 NPTNQ9Y639 398 aa11.41□□□□□ -0.58
VPS18-203ENST00000558855 SOX21Q9Y651 276 aaPredicted RBP11.41□□□□□ -0.58
VPS18-203ENST00000558855 A0A0G2JMP0 313 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 A0A0X1KG70 313 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 C5orf63A6NC05 138 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 F5H0A9 414 aaPredicted RBP11.4□□□□□ -0.58
VPS18-203ENST00000558855 MLNRO43193 412 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 ZNF205O95201 554 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 TXNDC12O95881 172 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 SBK2P0C263 348 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 IFNA8P32881 189 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 HIST1H3AP68431 136 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 SCRN3Q0VDG4 424 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 MOGQ16653 247 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 KLF17Q5JT82 389 aaPredicted RBP11.4□□□□□ -0.58
VPS18-203ENST00000558855 FAM201AQ5SY85 155 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 HIST2H3PS2Q5TEC6 136 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 OR2T2Q6IF00 324 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 CFAP77Q6ZQR2 320 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 HIST2H3AQ71DI3 136 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 ZER1Q7Z7L7 766 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 ZNF283Q8N7M2 679 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 OR4M2Q8NGB6 313 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 OR10AD1Q8NGE0 317 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 OR1F12Q8NHA8 337 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 ZNF420Q8TAQ5 688 aaPredicted RBP11.4□□□□□ -0.58
VPS18-203ENST00000558855 HAVCR1Q96D42 359 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 TIMD4Q96H15 378 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 C1orf147Q96MC9 270 aaPredicted RBP11.4□□□□□ -0.58
VPS18-203ENST00000558855 WDR76Q9H967 626 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 EFCAB1Q9HAE3 211 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 ZDHHC8Q9ULC8 765 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 PCDHB10Q9UN67 800 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 TMEM5Q9Y2B1 443 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 AP3M1Q9Y2T2 418 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 DOCK11Q5JSL3 2073 aa11.4□□□□□ -0.58
VPS18-203ENST00000558855 A0A0A6YYJ9 748 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 UNC119BA6NIH7 251 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 XKRYO14609 159 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 CCDC22O60826 627 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 KHDRBS3O75525 346 aaKnown RBP11.39□□□□□ -0.59
VPS18-203ENST00000558855 RHCEP18577 417 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 MMP16P51512 607 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 ARHGDIAP52565 204 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 KCNMB1Q16558 191 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 LYPD4Q6UWN0 246 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 NAA40Q86UY6 237 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 LINC00346Q8IVM7 164 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 GLB1L2Q8IW92 636 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 BCL6BQ8N143 479 aaPredicted RBP11.39□□□□□ -0.59
VPS18-203ENST00000558855 OR6V1Q8N148 313 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 NPEPL1Q8NDH3 523 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 ZNRF4Q8WWF5 429 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 TAF15Q92804 592 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS18-203ENST00000558855 OR2V2Q96R30 315 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 PLA2G12AQ9BZM1 189 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 EGLN1Q9GZT9 426 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 C7orf69Q9H7B7 122 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 CYSLTR2Q9NS75 346 aa11.39□□□□□ -0.59
VPS18-203ENST00000558855 AHCYL1O43865 530 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 HIST1H1CP16403 213 aaKnown RBP11.38□□□□□ -0.59
VPS18-203ENST00000558855 GSTM3P21266 225 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 PMELP40967 661 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 LSM6P62312 80 aaKnown RBP11.38□□□□□ -0.59
VPS18-203ENST00000558855 KRTAP27-1Q3LI81 207 aa11.38□□□□□ -0.59
VPS18-203ENST00000558855 GPR139Q6DWJ6 353 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms