RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 TP53P04637 393 aaPredicted RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 SCG5P05408 212 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 FCGR1AP12314 374 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 OSMP13725 252 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 ZNF3P17036 446 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 PAICSP22234 425 aaKnown RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 FASP25445 335 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 FMO3P31513 532 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 HTR5AP47898 357 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 RGS6P49758 472 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 SLC25A1P53007 311 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 HIST1H3AP68431 136 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 MRPS11P82912 194 aaKnown RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 NKPD1Q17RQ9 610 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 PCGF3Q3KNV8 242 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 ELFN2Q5R3F8 820 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 ZNF362Q5T0B9 420 aaPredicted RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 HIST2H3PS2Q5TEC6 136 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 MBNL2Q5VZF2 373 aaKnown RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 SLC27A4Q6P1M0 643 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 TMEM154Q6P9G4 183 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 SHQ1Q6PI26 577 aaKnown RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 HIST2H3AQ71DI3 136 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 VASH1Q7L8A9 365 aaPredicted RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 PRIMA1Q86XR5 153 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 HIPK1Q86Z02 1210 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 ZNF786Q8N393 782 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 PAQR4Q8N4S7 273 aaPredicted RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 ATG16L2Q8NAA4 619 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 SDR9C7Q8NEX9 313 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 SLC26A10Q8NG04 563 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 OR1F12Q8NHA8 337 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 OR5K1Q8NHB7 308 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 C10orf105Q8TEF2 133 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 UBASH3BQ8TF42 649 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 DUS3LQ96G46 650 aaKnown RBP7.28□□□□□ -1.24
TPM1-213ENST00000558400 TSSK2Q96PF2 358 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 SORCS2Q96PQ0 1159 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 COQ7Q99807 217 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 NIPSNAP1Q9BPW8 284 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 SYT3Q9BQG1 590 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 HDHD2Q9H0R4 259 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 VNN3Q9NY84 501 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 NKIRAS2Q9NYR9 191 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 TAAR3PQ9P1P4 343 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 ASH2LQ9UBL3 628 aa7.28□□□□□ -1.24
TPM1-213ENST00000558400 PLSCR5A0PG75 271 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 C17orf100A8MU93 164 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 RER1O15258 196 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 MPZL1O95297 269 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 ABHD16AO95870 558 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 TFP02787 698 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 HEXAP06865 529 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 GAAP10253 952 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 DAOP14920 347 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 USF1P22415 310 aaPredicted RBP7.27□□□□□ -1.25
TPM1-213ENST00000558400 GIFP27352 417 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 GRK5P34947 590 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 TMEM33P57088 247 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 PPP1CBP62140 327 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 LOXL1Q08397 574 aaPredicted RBP7.27□□□□□ -1.25
TPM1-213ENST00000558400 ZMAT1Q5H9K5 638 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 TEX30Q5JUR7 227 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 ZDHHC13Q8IUH4 622 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 CIARTQ8N365 385 aaPredicted RBP7.27□□□□□ -1.25
TPM1-213ENST00000558400 ZNF525Q8N782 197 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 SLC37A3Q8NCC5 494 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 ICA1LQ8NDH6 482 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 PROKR2Q8NFJ6 384 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 ABHD4Q8TB40 342 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 KLF14Q8TD94 323 aaPredicted RBP7.27□□□□□ -1.25
TPM1-213ENST00000558400 RDH5Q92781 318 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 PTP4A1Q93096 173 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 UTP4Q969X6 686 aaKnown RBP7.27□□□□□ -1.25
TPM1-213ENST00000558400 SLCO4A1Q96BD0 722 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 MARS2Q96GW9 593 aaKnown RBP7.27□□□□□ -1.25
TPM1-213ENST00000558400 FOXN4Q96NZ1 517 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 DIRC2Q96SL1 478 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 PITX2Q99697 317 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 PIMREGQ9BSJ6 248 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 RBM4Q9BWF3 364 aaKnown RBP7.27□□□□□ -1.25
TPM1-213ENST00000558400 OSBPL10Q9BXB5 764 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 PLA2G12AQ9BZM1 189 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 HINT3Q9NQE9 182 aaKnown RBP7.27□□□□□ -1.25
TPM1-213ENST00000558400 CMC2Q9NRP2 79 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 CYB5R1Q9UHQ9 305 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 ENOPH1Q9UHY7 261 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 GRIP1Q9Y3R0 1128 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 ARFGEF3Q5TH69 2177 aa7.27□□□□□ -1.25
TPM1-213ENST00000558400 HRNRQ86YZ3 2850 aaPredicted RBP7.27□□□□□ -1.25
TPM1-213ENST00000558400 NBEAL1Q6ZS30 2694 aa7.26□□□□□ -1.25
TPM1-213ENST00000558400 IGHV4-30-2A0A087WSY4 118 aa7.26□□□□□ -1.25
TPM1-213ENST00000558400 G3V2T6 193 aa7.26□□□□□ -1.25
TPM1-213ENST00000558400 TLX2O43763 284 aaPredicted RBP7.26□□□□□ -1.25
TPM1-213ENST00000558400 TIPRLO75663 272 aa7.26□□□□□ -1.25
TPM1-213ENST00000558400 SOX14O95416 240 aa7.26□□□□□ -1.25
TPM1-213ENST00000558400 LY6G6DO95868 133 aa7.26□□□□□ -1.25
TPM1-213ENST00000558400 CLPTM1O96005 669 aa7.26□□□□□ -1.25
TPM1-213ENST00000558400 NGFP01138 241 aa7.26□□□□□ -1.25
TPM1-213ENST00000558400 RAC2P15153 192 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms