RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PPICP45877 212 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 ARRB1P49407 418 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 HSD17B7P56937 341 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 GUCA2BQ16661 112 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 C1orf100Q5SVJ3 147 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 TMEM88Q6PEY1 159 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 RHOUQ7L0Q8 258 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 TRAPPC6BQ86SZ2 158 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 PARGQ86W56 976 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 OR5AP2Q8NGF4 316 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 STOML3Q8TAV4 291 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 GPBAR1Q8TDU6 330 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 ARL11Q969Q4 196 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC25A36Q96CQ1 311 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 DNAJA3Q96EY1 480 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF629Q9UEG4 869 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 C17orf105B2RV13 164 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 EEF1E1-BLOC1S5C9J1V9 151 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 STK17BO94768 372 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 NSA2O95478 260 aaKnown RBP10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 AVPR2P30518 371 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 RPL35P42766 123 aaKnown RBP10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 AKR1C2P52895 323 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 INSM1Q01101 510 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 AKR1C1Q04828 323 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 STK11Q15831 433 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 SGCBQ16585 318 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 KCTD9Q7L273 389 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 FAM160A2Q8N612 972 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 FRMD1Q8N878 549 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 NKAIN3Q8N8D7 197 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 OR52N5Q8NH56 324 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF519Q8TB69 540 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 CASTOR1Q8WTX7 329 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 HERVK_113Q902F9 699 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 NKD1Q969G9 470 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 PIK3IP1Q96FE7 263 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 KLHDC3Q9BQ90 382 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 VSX1Q9NZR4 365 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 GDF2Q9UK05 429 aaPredicted RBP10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 RAB22AQ9UL26 194 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 TMED7Q9Y3B3 224 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 R4GMQ9 66 aa10.61□□□□□ -0.71
VIPAS39-211ENST00000557658 A0A0C4DFX4 3053 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 LOC390937A0A1W2PQ73 354 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 F8W036 122 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 GMFGO60234 142 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 KLF8O95600 359 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 MT-ATP6P00846 226 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 CTLA4P16410 223 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 VAMP1P23763 118 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 PSMB6P28072 239 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 AKT2P31751 481 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 GALNSP34059 522 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 BLOC1S1P78537 153 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 SERTAD2Q14140 314 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF260Q3ZCT1 412 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 TMEM240Q5SV17 173 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 C1QL3Q5VWW1 255 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 Q6ZSR6 202 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 MDGA2Q7Z553 956 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 OR4K17Q8NGC6 315 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 PAQR8Q8TEZ7 354 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 FAM46BQ96A09 425 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 NXF5Q9H1B4 397 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 TXNIPQ9H3M7 391 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 CHMP1AQ9HD42 196 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 MKL2Q9ULH7 1088 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 EMC9Q9Y3B6 208 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 CACNA1IQ9P0X4 2223 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 FREM3P0C091 2139 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 LOC107986453A0A1B0GWG9 222 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 CPED1A4D0V7 1026 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 C5orf51A6NDU8 294 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 F8VVB4 439 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 F8VWA3 439 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 HCRTR2O43614 444 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 CRHP06850 196 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 ADCYAP1P18509 176 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF117Q03924 483 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 GPM6BQ13491 265 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 DHRS7BQ6IAN0 325 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 CHRDL2Q6WN34 429 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 CHST4Q8NCG5 386 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 OR4D6Q8NGJ1 314 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 RNF141Q8WVD5 230 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 MMABQ96EY8 250 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 ADOQ96SZ5 270 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 TCEAL2Q9H3H9 227 aaPredicted RBP10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 ATPIF1Q9UII2 106 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 CARHSP1Q9Y2V2 147 aaKnown RBP10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 TMEM131Q92545 1883 aa10.6□□□□□ -0.71
VIPAS39-211ENST00000557658 TEX13DA0A0J9YY54 714 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 DUS4LO95620 317 aaKnown RBP10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 ERCC1P07992 297 aaPredicted RBP10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 PGAM2P15259 253 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 AKR1C4P17516 323 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 RAB13P51153 203 aa10.59□□□□□ -0.71
VIPAS39-211ENST00000557658 B2MP61769 119 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms